Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele42g0067 | ATGGAAGAAGGTCAATGTTGGATTTGGAGAAAGAGAAAGCACTCATCTTTGAGCTCTTATAATAATAGTCTTGCTTCACCGACACACAAGTTCAGCTATGGCGATTCATGGGAAGAACAAGCTTTTGCAGAAGATGAGCGTCTTGGTGGCTGTATCTGGCCCCCAAGATCATACTCTTGCAGCTTTTGCAGCAGAGAGTTCAGGTCCGCTCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTCGGCTAAAGCAACCCCCAAGTCCACACAATAAACAAGATGATCAAACCAGTAGTCTTCTTGATCATCAAAATTCCTTCACATCTTCTTCTCTTGCTTATTCCAACGCTAACCCTAATAATTCTGAAATTCTTGCTTCTGAGGAGGTTAAATTAGCGCCTCTATCATCTTTGATTCAAGAGAATTCCCCTCCATACGATTCTTGTATTTCATGGTCAAACTTTGCTCAAGAAAGATTATATTCTCGAAAGGTCGATCTTATTACTGATCGTAATAAGGAAGAAGAAGCTGATATTGTGAGCTACAAGAGGAGAAGAATTATAACAGATAATTCATCATCAATTCGATTGATCTCCTCAAAATCAATTCCAGCTGATCATATCAAGTCTCAGATGTTCGAGTTTCTCAGTCCTAGTTCCATTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCACAGTCCTCCCAAGGTATAG | 726 | 0.4091 | MEEGQCWIWRKRKHSSLSSYNNSLASPTHKFSYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCSREFRSAQALGGHMNVHRRDRARLKQPPSPHNKQDDQTSSLLDHQNSFTSSSLAYSNANPNNSEILASEEVKLAPLSSLIQENSPPYDSCISWSNFAQERLYSRKVDLITDRNKEEEADIVSYKRRRIITDNSSSIRLISSKSIPADHIKSQMFEFLSPSSIEELDLELRLGHSPPKV | 241 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele42g0067 | 241 | Gene3D | Classic Zinc Finger | 55 | 116 | - | - | |
Lele42g0067 | 241 | SUPERFAMILY | beta-beta-alpha zinc fingers | 55 | 84 | IPR036236 | - | |
Lele42g0067 | 241 | MobiDBLite | consensus disorder prediction | 77 | 93 | - | - | |
Lele42g0067 | 241 | PANTHER | OS07G0101800 PROTEIN | 33 | 238 | - | - | |
Lele42g0067 | 241 | Pfam | C2H2-type zinc finger | 58 | 82 | - | - | |
Lele42g0067 | 241 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 60 | 80 | IPR013087 | - | |
Lele42g0067 | 241 | SMART | c2h2final6 | 58 | 80 | IPR013087 | - | |
Lele42g0067 | 241 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 58 | 85 | IPR013087 | - | |
Lele42g0067 | 241 | MobiDBLite | consensus disorder prediction | 74 | 106 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele42g0067 | Lele-ChrLele42 | 482807 | 483532 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele42g0067 | 1 | 241 | C2H2 Transcription Factor Family | AT5G06070 | 33.074 | 2.03e-28 | 105 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lele42g0067 | zf-C2H2_6 | 9.4e-07 | CL0361 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lele42g0067 | 42 | 482807 | 483532 | Lele42g0067 | 42 | 482807 | 483532 | ECH | |
Lele42g0067 | 42 | 482807 | 483532 | Lele43g1294 | 43 | 21131709 | 21137594 | hybridization | |
Lele42g0067 | 42 | 482807 | 483532 | Lele44g1286 | 44 | 21200000 | 21201642 | hybridization |