Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0054 ATGGAAGAAGCTTTAAGGAGTGCCTGGTCAGAAGAAGAGGAGCTTTTGAGAGAGATAACAGAAGACGCAGTTGATGAGAATTACTATACGAGAAAATCAAGTGAAGAGCAAGCCATTATTAATAGGTTCATCTCCAACATCTACTCAGGACCTACCATTTCTGATATTGAGAATGCCTTATCAGTCACCACATCCCACCAAAGAGACAATTTCCACCAACTCTCTTCACCACCCAGTGTTTGCATATTGGAAAGAGGTTTGAAATTGAGCAGGAGTGAGAATAAGTATACCCTGAAAATCAAGTGCTATGGCAATGGCGGATTGAGTGATGATGGATATAAGTGGAGGAAGTATGGACAGAAATCTATTAAGAACAGCCCAAATCCTAGGAGCTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAAGTAGAGAGATCCAGTGAAGAGCCAGACACTGTTGTTGTCACCTATGAAGGGCTCCATCTCCACTTTGCTTACCCATATTTCTTAATGGGCGAACCACATCACCCTCAAGCCCATCCATCATCGAAGAAGTCTAGGCCTATCTATTCACAAGCCCAAGACCATGATGCAGCCCAAGAATGTCAGCAAGCTCATATGGGCCAGAATCCCATACAAGCGGATGTTACCTTAACCTCTACGGAAAACATAGGCCCACAAGGATTGCTTGAAGACATGGTGCCATGGATGATTCGGAACCCTAGTTTTAGTAATCCCTCAAATTTTTGCTGCTCTTCTTCATACCACTCTAGTTACTCCACCTCCTCTCATCCCATTGGCTTCAATTCCAGTGTTTAA 828 0.4384 MEEALRSAWSEEEELLREITEDAVDENYYTRKSSEEQAIINRFISNIYSGPTISDIENALSVTTSHQRDNFHQLSSPPSVCILERGLKLSRSENKYTLKIKCYGNGGLSDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSSEEPDTVVVTYEGLHLHFAYPYFLMGEPHHPQAHPSSKKSRPIYSQAQDHDAAQECQQAHMGQNPIQADVTLTSTENIGPQGLLEDMVPWMIRNPSFSNPSNFCCSSSYHSSYSTSSHPIGFNSSV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0054 275 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0054 275 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 205 IPR044810 GO:0003700
Lele42g0054 275 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0054 275 SUPERFAMILY WRKY DNA-binding domain 106 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele42g0054 275 SMART WRKY_cls 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele42g0054 275 Gene3D WRKY domain 97 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0054 Lele-ChrLele42 413657 416048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0054 36 243 WRKY Transcription Factor Family AT5G43290 42.857 6.67e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele42g0054 WRKY 1e-25 CL0274