Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0050 ATGAATACACATTCTTCCTCTACCGTGACCAACGAGGAGCATTCTCCGGACGATTTTGATTTTTCTGATGCTGTTTTGAGCTACATAAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACATGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCACTGGGTGAAAAGTACCCACCTTCTTCACCTGCACAAAATCATCCAAGTCATATGATCAATGAAAATGATGGGGGCATGGGAAATAATTTCCCCAGAAATTACAGTGATTATTACAGTAATAACAACTATGGTAATTTCAACGGACCTTTCATTCATCAGTCCTTGTCTCAAAATCCTAATGAGTTTCCCTCACAACTTATCCGAGGTAACTGCATTTCTCGGTCATCTTACAGCTCTTCGAGCAGTGTTGTAAGTGGTGTGGAAGGACCTGTGGATTCTCCAAGCAGTATTCATCAGGTTCCAGATCTGAACAGCGAGAGCCAATCAATATCGCAATTTAACAAAGGCGTCGAGGAGGCTAGTAGGTTTCTTCCAAATGGGAACAAGCTGTTTGCTGATTTACGTTTGTCTAATTTATCACCAGAAGAACCAAGAGCAAGAAGGACTCAAGAAATATCGTCAGCCAAGGTGGAGAAAGATGAAGGGGATGATCTTCTCGGCGGGTCGAAGGTAAGAAAGCAGCCACACAGGGGAGATGAAGATGAAGAAGAAGAAAAGAGTAGCAAGCAAGCAGCAGTTTATACAGAACCAACACTACGTTCTGTGATGTTTGATCTAGTGCTTCTTTATACTGATGGGGAAGGTAAGAACCATTACATGGCTCGTCGTGAAGCGTTGCAGAACAAGACCATCAAGGCGGTGATGTCAAACGGTGGTGAAGCCAAAGCTTCAAACACCGGTAAGGGGCGTGGGAAGAAACAAAATGGGAGGAAGGCGGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCACAAGCCGTTGCAGCAGATGATCATAAGAGTGCACAAGAGTTGCTAAAGCAGATCAGGCAGCACTCAAATCCTTTTGGGGATGGGAATCAAAGGTTAGCACATATCTTTGCCGATGGACTCGATGCGCGCTTGGCCGGCACCGGTAGCCAGATTTACAAAGGACTCGTAAGTAAAAAAAGGTCGGCTGCTGATTTACTGAAAGCCTATCATCTCTACCTTGCAGCATGCCCTTTTAGGAAGATATCTAATTTTTTCTCAAATGTCACAATAAGGACAGCTTCCGAGAATTCAGCGAGGGTCCATATTATAGATTTCGGTATTCTTTTTGGTTTCCAGTGGCCAACTTTCATACAGAGATTGGTAATGAGAACAGGAGGACGACCACCAAAAATCCGAATCACCGGAATAGACTTCCCACAACCTGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACGGGAAGACGTTTAGCAGATTATGCAAAAGCTTTCCATGTTCCATTTGAGTATGTTGCCATAGCTAAGAAATGGGAAACTGTTACGCTTGAGGAACTCAAGATTGACAGGGACGAGTTCCTGGTTGTGAACTGTTTATATAGAGCCAAGAACTTGTTAGATGAATCTGTGGCAGTGGAGAGTCCGAGGAATGCTTTCCTGAATCTGATAAGAAAGATCAATCCAGATATATTCATTCATGGGATCATCAACGGGGCGCTCAACGCGCCTTTCTTTGTCACCAGGTTCAGGGAAGCCTTGTTTCACTACTCATCACTGTTCGATATGCTGGAGACCATCGTGCCTCGAGAGGACTGGGAGAGAATGCTGATAGAGAAGGAGATATTCGGGAGAGAAGCGTTGAACGTGATAGCTTGCGAGGGATGCGAGAGATCGGAGAGGCCGGAGACGTATAGGCAGTGGCAAGCTCGGATTCTAAGAGCAGGGTTTAGACAGATTCCATTTACTCGAGATGTCGTACAGAGGGCAATGAAGAAAGTGAGGGGTAGCTACCACAAGGATTTTCTGATAGATGAAGACAGCAAGTGGTTGTTACAAGGTTGGAAGGGACGAATCATCTATGCACTTTCTTGTTGGAGACCTTCCTGA 2097 0.4459 MNTHSSSTVTNEEHSPDDFDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGEKYPPSSPAQNHPSHMINENDGGMGNNFPRNYSDYYSNNNYGNFNGPFIHQSLSQNPNEFPSQLIRGNCISRSSYSSSSSVVSGVEGPVDSPSSIHQVPDLNSESQSISQFNKGVEEASRFLPNGNKLFADLRLSNLSPEEPRARRTQEISSAKVEKDEGDDLLGGSKVRKQPHRGDEDEEEEKSSKQAAVYTEPTLRSVMFDLVLLYTDGEGKNHYMARREALQNKTIKAVMSNGGEAKASNTGKGRGKKQNGRKAVVDLRTLLVLCAQAVAADDHKSAQELLKQIRQHSNPFGDGNQRLAHIFADGLDARLAGTGSQIYKGLVSKKRSAADLLKAYHLYLAACPFRKISNFFSNVTIRTASENSARVHIIDFGILFGFQWPTFIQRLVMRTGGRPPKIRITGIDFPQPGFRPAERIEETGRRLADYAKAFHVPFEYVAIAKKWETVTLEELKIDRDEFLVVNCLYRAKNLLDESVAVESPRNAFLNLIRKINPDIFIHGIINGALNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYRQWQARILRAGFRQIPFTRDVVQRAMKKVRGSYHKDFLIDEDSKWLLQGWKGRIIYALSCWRPS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0050 698 MobiDBLite consensus disorder prediction 143 173 - -
Lele42g0050 698 ProSiteProfiles GRAS family profile. 315 696 IPR005202 -
Lele42g0050 698 MobiDBLite consensus disorder prediction 202 251 - -
Lele42g0050 698 Pfam GRAS domain family 324 696 IPR005202 -
Lele42g0050 698 MobiDBLite consensus disorder prediction 202 255 - -
Lele42g0050 698 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 240 690 IPR005202 -
Lele42g0050 698 MobiDBLite consensus disorder prediction 158 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0050 Lele-ChrLele42 381447 383543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0050 17 697 GRAS Transcription Factor Family AT2G37650 53.247 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele42g0050 GRAS 1.4e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0050 42 381447 383543 Lele43g1310 43 21227719 21234894 hybridization
Lele42g0050 42 381447 383543 Lele44g1302 44 21291370 21293631 hybridization