Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0044 ATGGGTGCGTGCTGGAGCAATCGGATCAAGGCCGTGAGTCCTTCAAGTACAGGATTCATTTCAAGAAGTGTCAGCAGCAATGGCTGTGACACGAGCTCAAACAGCAGGAACTCATCATCCTCCATACCCATAACTCCTCGGAGCGAGGGAGAGATCTTACAATCTTCCAATTTGAAGAGCTTCAGTTACCGCGAACTTAAAACAGGCACGAGAAATTTTCGCCCAGATAGTATCTTAGGAGAGGGTGGGTTTGGTTCAGTTTTTAAGGGATGGATTGATGAGCACTCGCTTGTTGCAACCAAGCCAGGGACTGGCATAGTTATTGCTGTGAAGAGGCTTAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGCATCATCCTAATCTTGTCAAGCTGATAGGGTACTGCTTGGAGGACGAGCATCGACTTCTGGTTTATGAATTTATGTCTAGGGGCAGTGTGGAGAATCATCTGTTCAGAAGAGGATCTCATTTTCAGCCACTATCTTGGTCTTTGCGAATGAAAATAGCACTTGGGGCTGCCAAGGGTCTTTCATTTCTCCATAGCACAGAACCTAAAGTCATATACCGGGACTTCAAGACTTCTAATATACTTCTCGATACAGATTATAATGCCAAACTTTCTGACTTCGGGTTGGCCAGAGATGGGCCAACCGGTGACAAGAGTCATGTCTCAACTCGAGTCATGGGTACTCATGGATATGCAGCGCCAGAATATCTTGCGACAGGACATCTTACTGCCAAGAGTGATGAATCAAAGGACACGGCAAAAAGTTCTGATAAGAAAGAGCATCGTGTAAAAAGCACCAGTGTTAGTCATCATCCGAAGGGCTTACCTGCATCCACAAGAAATCGCGCCAGACCTGCGCCGTCAAATGCCGCTTATCCCAAGCCATCTGCTTCTCCCCTTTTTGCTTAA 969 0.4654 MGACWSNRIKAVSPSSTGFISRSVSSNGCDTSSNSRNSSSSIPITPRSEGEILQSSNLKSFSYRELKTGTRNFRPDSILGEGGFGSVFKGWIDEHSLVATKPGTGIVIAVKRLNQDGFQGHKEWLAEINYLGQLHHPNLVKLIGYCLEDEHRLLVYEFMSRGSVENHLFRRGSHFQPLSWSLRMKIALGAAKGLSFLHSTEPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVMGTHGYAAPEYLATGHLTAKSDESKDTAKSSDKKEHRVKSTSVSHHPKGLPASTRNRARPAPSNAAYPKPSASPLFA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0044 322 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Lele42g0044 322 MobiDBLite consensus disorder prediction 17 49 - -
Lele42g0044 322 Pfam Protein tyrosine and serine/threonine kinase 77 267 IPR001245 GO:0004672|GO:0006468
Lele42g0044 322 PANTHER OS01G0588500 PROTEIN-RELATED 34 267 - -
Lele42g0044 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lele42g0044 322 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Lele42g0044 322 MobiDBLite consensus disorder prediction 264 284 - -
Lele42g0044 322 Gene3D Transferase(Phosphotransferase) domain 1 159 267 - -
Lele42g0044 322 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Lele42g0044 322 MobiDBLite consensus disorder prediction 262 322 - -
Lele42g0044 322 SUPERFAMILY Protein kinase-like (PK-like) 38 267 IPR011009 -
Lele42g0044 322 ProSiteProfiles Protein kinase domain profile. 73 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0044 Lele-ChrLele42 345503 348032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0044 51 267 Glycoside Hydrolase AT3G07070 54.587 7.50e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele42g0044 Pkinase 1.1e-34 CL0016