Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0043 ATGGGTGATCCGTACCCTTATGGGCTGCTCGATTTCCAGCAACTCATATCAGGAAGAACCCACCACCATGACTTGCCGGAGCCACCGTGTGTGGGTGGTGTCCCTGCCGCTGCTGCAGTAGCTTCTACTCCACCACTACCGAACAACTACAACGTCGTTTTCTCTCATGGCTTTGCTACTACCTTTGCTCCTTCAAATCATCATCAAGACTATTCCTCAAGCGTTATCAATATTATTCCCACCACCTCCACAAACCCTACTGTTACTGCTTCTTCTTCTTTAGTAAACCATGGCACTACTGCTGCATTCTGTAGCAGCAGCAGTAGCATGGAAGCTGCAGAAAAGCGATGGCTTGGATTTGATGCGATGGCGAACAATAGATGGCCGAGACAAGAGACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGATTCAAAGTTCAGAGAGACAAATCACAAGGCCCCCTTATGGAATGAAATTTCTAGGATAATGAGTGAAGAATATGGCTACCAAAGAAGTGGGAAAAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGAAAAGCAGGAAGACAAGAAGGGAAACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCAGCAACGAACAATATTGCTACTTCTGCTAATTACCAACCTCCATTAATGACCTTCACAGATGGCGAAGTTCTTCATCACAACATCAAGTACTGCTCAAAGAACGGCCTCAGTCTGTCAAACAATTCATCAGACCAGTTCGAGACATCCTCGTCTGAAAACAATGATGACAAGGACCTGTCAGCCATAACCTATATGATGAAGCAAAAACAGGTGGATCAGGTAGACCAGCAAAGAGAGAGTGGAAGAATGAGGGTGAAGAAGAGCTTGAGAGTTGAGGTTGAAGAGATTGTGGACTCTCACATGAGGAAGATGATAGAGAATCAAGACGCTTGGATGGAGAAGATGATGAGTTTAGTTGAGCATAGAGAGCAAGAAATGGTGTATAAGGAACAAGAGAGGAAGAAAGATTCAATAAGATTCGATCAACAAGTGAATCAACTCTGGGCTAAAGAGAGAGCTTGGGTTGCAGAAAGAGACAATGCATTAATGGAGGTCGTGAAGAATCACTTGGGAAAAGAGCTAATTGTTGGAAATCGTGCCCTAGGGGCCAATCATTGTCTTATGAACATTATTGATTTATGA 1233 0.4323 MGDPYPYGLLDFQQLISGRTHHHDLPEPPCVGGVPAAAAVASTPPLPNNYNVVFSHGFATTFAPSNHHQDYSSSVINIIPTTSTNPTVTASSSLVNHGTTAAFCSSSSSMEAAEKRWLGFDAMANNRWPRQETLLLLEIRSRLDSKFRETNHKAPLWNEISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQEGKHYRFFRQLEAICGESATNNIATSANYQPPLMTFTDGEVLHHNIKYCSKNGLSLSNNSSDQFETSSSENNDDKDLSAITYMMKQKQVDQVDQQRESGRMRVKKSLRVEVEEIVDSHMRKMIENQDAWMEKMMSLVEHREQEMVYKEQERKKDSIRFDQQVNQLWAKERAWVAERDNALMEVVKNHLGKELIVGNRALGANHCLMNIIDL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0043 410 FunFam trihelix transcription factor PTL-like 128 190 - -
Lele42g0043 410 Pfam Myb/SANT-like DNA-binding domain 126 213 IPR044822 -
Lele42g0043 410 Gene3D - 128 190 - -
Lele42g0043 410 PANTHER FI21293P1 105 387 - -
Lele42g0043 410 CDD GT1 126 192 - -
Lele42g0043 410 ProSiteProfiles Myb-like domain profile. 126 185 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0043 Lele-ChrLele42 329091 331283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0043 127 392 Trihelix Transcription Factor Family AT5G03680 45.126 3.55e-70 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele42g0043 Myb_DNA-bind_4 5.2e-20 CL0123