Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0021 ATGGAACTAAATAAGCCGGAAATTTTGTTTGTTGCCAACCCTAAGGGGGCTCCGGGTGTGTTTACTCAACACATACATGCAGAATCAGCTAGTGGTGTTTTAAAAACAGGACCGGATGTACATAATAATATCTCAATACAGCCAGGGAAAGAATTTTCTGCAGAGTTTAGTCATGAAGGAATTGCTGGTAGAAGAGAACCTGCTGCACCTGATTCACTCCGAAATCATGAAGGTAGGTTTGGATTTCACGGGGAGAATGGCCAAGTGAGATATGAAGATCTTACTAATAATCTGGGATTGAAGAGAATGGACTCTGAGAATCCTTTTGAAATTGCTGATCTTAACTTCACAAGAGAGGCAACTCAAGAGATAGAAAATGGGGCTTCTGTTGATAAAAATAGCAAAAATCAGAAGGAATATGGCAATGTTACACAAGGAGTGAGGAAGACTCTTGGCGAATCAGTTGGTGACCAAGCTGATACAGGAACACCTGGGTCTCCCTTTCTTAGAAAAGAATCCACCTATTCCAGTGAAGTTTCTGGTTTAGGAGTTTCAGATGATTCTCAATCTGGAATAATTAAGTTACTATGCAGCTTTGGTGGAAAAGTATTACCAAGGCCCAGAGATGGGAAACTCAGATATGTAGGGGGAGAGACTCGCATTATATCTATCCGAAAGGATATTTCGTGGCAAGGGCTTGTTAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATTAAGTACCAGCTTCCAGGTGAGGATCTTGATTCTCTAATATCTGTCTCCTCTGATGAGGATCTTCAAAATATGATGGAAGAATACCATGGACCTGAGAGGCATAAGGGATCTCAAAGACTTCGAATTTTCTTAATTTCCTCGGGTGAATCTGAAAAGGAATTGTCATTCAAAGCAAGAACTGATCAGCAGAGTAATCCCGATTACCAATATGTTGTTGCTGTGAATGGCATAGGGGACTGTTGTCCAAGAAAAAATAGTTCAGGGCAGAGCTTGACAAATGAAGTTGGTTCATTAGGGACAAATTTGAATTTTGCTCCTGACTTTCAAAAAAGATTTCCAAATGCACCTTATTCTTCAGAGATCGAGGGAGGTGGTAGTGCTATACATCCAAATGAATTTTTTAATGATTCTCAGAATATGCAGAGGACCTCCAATCAATATCAGCAGATTTCTTTTACTCCATTTCAAGGAGGAAATTTGAGCCCAGTTTATACACAGTCTAAAGGTAATAGCTCATGCCACGAAAGTGCTGCAAGTAGCCTATCCTTTATTACTGCCCAAGTATCACCTGAGACATCCAATGTAAGCGCTGCTGATAGCAGATACTCCCAACAAATGGCTGGGACTTTCCTAACTGACAATCACCCCTGCCAACAATCTGATATTGGTCTGCCAGAGCAGTGCCATGGGAAGCTATTCCAAAATAATCCTGGCAAGGAATTTATAACTGCTTCGTATTCTAATCAAATTGACGGTTGTAATGATGAAATTTTGGGTGAAAGGCCCACACATCAATCAGGAAATCCTCTTTCCAGCCTGGGCGAGTCAATTTGTCCAGAGTCTGGATCTAATTGTATTCCTGATTCTCTAAATTGGATACCTCATGCATTTTCTGATTCAAAGTTGCTTGAGAGTGGATTAAAGTCTGGTTACTGCTCTCAAGAAGGGATTGGTCAATTTTCCTCGTTGAACCTTTCAATGGCTCAGTTATCTTCAATGGTACCCTCTAGTGTTTCACAAAGGGACCCTATAGAAATCCAGCATGATCCCCTTCTCATTTATCCACAAATACAAAGCAAGATGCCAAAAGTTGAGCCAGGTGAGTTGCACAGAGGGCAGGATTTTCCATTTTCTTCACCATCTGCAGTATTTTCAGGAGTGAACGATCCTATTCAGAAGGATAACATTTTATACAGTAAGAGGAATCCTTTAGCTCAAACTGATTTAACTGCATCTAGCTTTATAGAGCGGCAGTGTGGGAACAATACTGTGAATATAGAAATCATGAAGAGAATTGAAGACAAAAATTCTCTTCAGAGTAAGGATAGCAATCTTCATGAGAGGGAATCACCTGCCATTGCTATAGAGCATGTGAATGAATTGCATCTTCTGGACTCTTCTCCAGCATCTAATTTAAACATTAAGATTCATAAACAGAATCAGTTGGAGCAATATTCTGAGGGTATGATTTCTGCATCCTCTTGCATGACAGGAATTTCCCAAAATGATCTGATTGAGAAGACCGCATCAGATTTTCTTGACATGAACCATAGGACTAGTGATGGAAGAGAATGTGGTTTAACTGAAGGTTTGAATGGTGAGCTAGGATTTGATTTTTCTTGGACCAGAAAATCTGGGTTTAATGCTTCATCTCTAAAATGTGAAGGAAACTCTTGTGGTAAAACTTCTCTAAGCAATTATTTGTTAGGGCTGTCCATGGACCCGGTTCCTCATAAACAGGCACAAGTTCAACCTTTTCAGAAGGATACAGATCTCTATGGAAATCCGACAGTAAGCTCAGCTTTTTTGTATTCTTCAGTACTTCATGATGACCCTGGTCCAAGTTCAAAGTTGCCTGTGAATGAACTACAGAACTCAAGCAAGAATGTTGTGTTTAAAAGAGCATCTTCTCTCATTGATGATGACCTTGTAGCCAGTTCTAGTCGAATGGTTAATCAGTATAGTTCTGGAACTCTTGCCAGTGAAACAAAAGTTGAAGATATCATGTTGGAGCAATCAAAAAATTTTGGAAAGTGTGACAATTCAAATAAAGTTGAGCCACTTATTACTATAGAAGATGTGACTGATTTTGTTCCTCAAAGCGTTGAGTCTTTATTGGTGCCCAACCCACATATAGTGGTAGAAATTGGAAGTGATGTTTTATCCCCATCTGCAACAGAGTTGGAGAGCACTATTCCAGATTCTGAACCTGAGGATTTTAAAGATAATGAAGAAGGAAAGAATGAATCCCTTACTGATGCAATGATAGCAGAAATGGAAGCCAGCATCTATGGCTTGCAGGTAATTCAAAATGCTGATCTCGAAGAACTTCGGGAGTTAGGATCTGGTACTTATGGAACTGTTTACCATGGAAAATGGAGGGGAACGGATGTTGCTATAAAAAGAATTAAGAAGAGCTGCTTTTCAGGAAGATCTTCTGAGCAACAACGATTGACAAAAGACTTTTGGAGAGAGGCACAAATCCTCTCAAATCTTCACCACCCCAATGTGGTTGCGTTTTATGGAGTTGTACCAGATGGAGCTGGAGGAACCTTGGCAACTGTAACCGAGTATATGGTTAATGGTTCCCTTAGGCATGTCCTTGTCAAAAAGGATAGATTACTTGATCGTCGTAAAAAGCTAATAATTGCCATGGATGCGGCTTTTGGAATGGAATACTTGCATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGATCCACAACGACCCATATGTAAGGTCGGAGATTTTGGATTATCAAGAATTAAACGCAACACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAATGGCAGTAGCAACCGGGTTTCTGAGAAGGTTGATGTTTTCTCATTCGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAGCCTTATGCAGATATGCATTGTGGCGCTATTATTGGGGGCATTGTAAAGAATACTCTTCGACCACCGATTCCGCCACGTTGTGACCCCGAATGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGACCCTGATAGCCGACCGTCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGACCCTTCAAGCTAAGCCTCATAATCAGGTGCGGCAGACAGCACGCAGTGTTCATTCCTGA 3927 0.4085 MELNKPEILFVANPKGAPGVFTQHIHAESASGVLKTGPDVHNNISIQPGKEFSAEFSHEGIAGRREPAAPDSLRNHEGRFGFHGENGQVRYEDLTNNLGLKRMDSENPFEIADLNFTREATQEIENGASVDKNSKNQKEYGNVTQGVRKTLGESVGDQADTGTPGSPFLRKESTYSSEVSGLGVSDDSQSGIIKLLCSFGGKVLPRPRDGKLRYVGGETRIISIRKDISWQGLVKKTLGICNQPHTIKYQLPGEDLDSLISVSSDEDLQNMMEEYHGPERHKGSQRLRIFLISSGESEKELSFKARTDQQSNPDYQYVVAVNGIGDCCPRKNSSGQSLTNEVGSLGTNLNFAPDFQKRFPNAPYSSEIEGGGSAIHPNEFFNDSQNMQRTSNQYQQISFTPFQGGNLSPVYTQSKGNSSCHESAASSLSFITAQVSPETSNVSAADSRYSQQMAGTFLTDNHPCQQSDIGLPEQCHGKLFQNNPGKEFITASYSNQIDGCNDEILGERPTHQSGNPLSSLGESICPESGSNCIPDSLNWIPHAFSDSKLLESGLKSGYCSQEGIGQFSSLNLSMAQLSSMVPSSVSQRDPIEIQHDPLLIYPQIQSKMPKVEPGELHRGQDFPFSSPSAVFSGVNDPIQKDNILYSKRNPLAQTDLTASSFIERQCGNNTVNIEIMKRIEDKNSLQSKDSNLHERESPAIAIEHVNELHLLDSSPASNLNIKIHKQNQLEQYSEGMISASSCMTGISQNDLIEKTASDFLDMNHRTSDGRECGLTEGLNGELGFDFSWTRKSGFNASSLKCEGNSCGKTSLSNYLLGLSMDPVPHKQAQVQPFQKDTDLYGNPTVSSAFLYSSVLHDDPGPSSKLPVNELQNSSKNVVFKRASSLIDDDLVASSSRMVNQYSSGTLASETKVEDIMLEQSKNFGKCDNSNKVEPLITIEDVTDFVPQSVESLLVPNPHIVVEIGSDVLSPSATELESTIPDSEPEDFKDNEEGKNESLTDAMIAEMEASIYGLQVIQNADLEELRELGSGTYGTVYHGKWRGTDVAIKRIKKSCFSGRSSEQQRLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPDPDSRPSFTEITSRLRSMSMTLQAKPHNQVRQTARSVHS 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0021 1308 ProSitePatterns Protein kinases ATP-binding region signature. 1027 1052 IPR017441 GO:0005524
Lele42g0021 1308 Gene3D Transferase(Phosphotransferase) domain 1 1109 1307 - -
Lele42g0021 1308 SUPERFAMILY Protein kinase-like (PK-like) 1009 1283 IPR011009 -
Lele42g0021 1308 SUPERFAMILY CAD & PB1 domains 209 297 - -
Lele42g0021 1308 Gene3D - 211 294 - -
Lele42g0021 1308 MobiDBLite consensus disorder prediction 151 171 - -
Lele42g0021 1308 CDD PB1_UP2 196 292 - -
Lele42g0021 1308 ProSiteProfiles Protein kinase domain profile. 1021 1291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0021 1308 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Lele42g0021 1308 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1109 1300 - -
Lele42g0021 1308 SMART serkin_6 1021 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele42g0021 1308 MobiDBLite consensus disorder prediction 971 994 - -
Lele42g0021 1308 PRINTS Tyrosine kinase catalytic domain signature 1140 1158 IPR001245 GO:0004672|GO:0006468
Lele42g0021 1308 PRINTS Tyrosine kinase catalytic domain signature 1255 1277 IPR001245 GO:0004672|GO:0006468
Lele42g0021 1308 PRINTS Tyrosine kinase catalytic domain signature 1211 1233 IPR001245 GO:0004672|GO:0006468
Lele42g0021 1308 PRINTS Tyrosine kinase catalytic domain signature 1103 1116 IPR001245 GO:0004672|GO:0006468
Lele42g0021 1308 SMART PB1_new 207 294 IPR000270 GO:0005515
Lele42g0021 1308 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1014 1108 - -
Lele42g0021 1308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1146 1158 IPR008271 GO:0004672|GO:0006468
Lele42g0021 1308 PANTHER SERINE-THREONINE PROTEIN KINASE 259 1287 - -
Lele42g0021 1308 Pfam PB1 domain 208 291 IPR000270 GO:0005515
Lele42g0021 1308 MobiDBLite consensus disorder prediction 1288 1308 - -
Lele42g0021 1308 Gene3D Phosphorylase Kinase; domain 1 1014 1108 - -
Lele42g0021 1308 CDD STKc_MAP3K-like 1027 1284 - -
Lele42g0021 1308 Pfam Protein tyrosine and serine/threonine kinase 1022 1284 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0021 Lele-ChrLele42 148309 154786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0021 193 334 MAP Kinase Kinase Kinase AT1G16270 59.859 2.27e-41 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lele42g0021 PK_Tyr_Ser-Thr 2.4e-63 CL0016