Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0016 ATGGATAGGTACCAGAAGGTCGAGAAGCCAAAACCCGAATCGCCGATAAACGAGAACGAGATCCGAATCACCACCCAAGGCGCTATCAGAAACTACATCAGCTATGCCACCTCTCTTCTCCAGGAAAAACATGTAAGGGAGATCGTCTTGAAGGCAATGGGACAGGCAATCAGCAAGACAGTTGCTATTGCTGAGATTTTAAAGAAGAATATTCCCCGGCTGCATCAAGATACTGCCATCAGCTCAACTCATATGGCCGAGGCCGGGGTCGGGGAAGAGGGAGAGGAAGAGGAAGAGGATGGGGAAGGGGTGGATATGGCTATCAAGGTGGAAACTATCAAGGTAGTTATGGAACTTATCAAGGCGGGTATGGATATTACCAGGGTGGATATGGAAATTATCAAGATAATGGCGGTTATTCAAATCGGGGCCGCGGTGGTGGGAGAGGAAGAGGTTGGGGTTATCGTGGTACTGGTTATGAAAGAGGCAGAGGTGGAGGCAGGGGTTATAGCCGTGGTCGGGGACGAATGGGAGGACGTTCTTCAAGGGGTGGAGGCAACCAGGCATGATGTTAGTTGA 579 0.5026 MDRYQKVEKPKPESPINENEIRITTQGAIRNYISYATSLLQEKHVREIVLKAMGQAISKTVAIAEILKKNIPRLHQDTAISSTHMAEAGVGEEGEEEEEDGEGVDMAIKVETIKVVMELIKAGMDITRVDMEIIKIMAVIQIGAAVVGEEEVGVIVVLVMKEAEVEAGVIAVVGDEWEDVLQGVEATRHDVS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0016 192 SUPERFAMILY AlbA-like 16 87 IPR036882 GO:0003676
Lele42g0016 192 Pfam Alba 19 82 IPR002775 GO:0003676
Lele42g0016 192 PANTHER RIBONUCLEASE P SUBUNIT P25 1 87 - -
Lele42g0016 192 Gene3D - 14 123 IPR036882 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0016 Lele-ChrLele42 112024 116339 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0016 42 112024 116339 Lele42g0016 42 112024 116339 ECH
Lele42g0016 42 112024 116339 Lele43g1071 43 19175436 19180116 hybridization
Lele42g0016 42 112024 116339 Lele44g1049 44 19206818 19210145 hybridization