LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele42g0006	ATGCCAATCTTGGCCCGATGTGACCCGGTGATGGGTGAGGAGGAAAGTAAAGATTTGGAAGTGCTAGGGGAATCAGAGCAGGCTATTCTTCTCGAAGACAATGATGCCAGTAACGAAGCCTGTTCATCCTTGCCAGATGAAGAGCTTGTCAATCAGAAGAGGAATAGTAGTGAAGGGACATTGCCCGATCAAGGTAGTTTGACTGATGATCTTAAAAATCAATTGGATGCAAAAGGGCGTTGGACACGATACAGGGTGGCTAAAGTTAGCCTATTGATATGCCCATTTTGGTTCTTTGCCCAACTCACTTTTAACCTCTCGCTGAAGTATACTACGGTTACATCAAATACTATCTTAAGCAGTGCATCCAGTCCATTTACATTCTTGATCTCTCTAGCAATTTTGGGTGAGAAATTCACTTGGATAAAGCTCTTCAGTGTTCTTCTTTCCACGGGAGGAACGATAATTGTGAGTCTTGGTGATTCACAAAGTGGTTTAAGCACAATTGCTTCAAATCCTTTGGTCGGAAACATTCTCGCTCTTGTTTCAGCAGCTTTATATGCAGTTTATATCACCCTTATTCGCAAAAAACTGCCTGATAATGATGGAAAGTCTGGCCGTGCCAGCATGGCTCAGTTTCTTGAATATCTCGGGCTTTTCAATCTTTTTATTTTTCTTCCTATTGCCCTCACATTAAATTTCACCAAGGCGGAACCATTTCATTCATTCACCTGGAAGCAGCTCGGCCTGATTATTGGTAAAGGAGGGTTTCTTGTAAATTTTGTTGGAACTGAATTCATGTCAACTTGTGATAAAATTTCTGAATTCTGTGAAGTTCAGTGGCAAGATCAAAACAAATCAGCAACCTGTTTCTGTTCTGTGCATTATTGCAATTCTTTCAGCTGATTGTTGGATAACGTGCAGAGTGATTACTTGTGGGCCAAGGCAGTTCTTCTAACATCAACCACCGTGGCTATGGCCGGACTTATGATTCAGGTGCCATTAGCAGCCATCGTGGACAGTTTGACTGGCCATGCACCTGGCCTGTTGGATTGCCTGGGAGCAGTAGCTGTGATGATTGTCTTTGCCGGAATCAATATTCCCTCGGATGCCTTCAAAAAATCCAGAGAAGCGAGTGTTGAGTTGGAAAACGAGTGTGTGAATTCCACAAGCCAACATTCAGGTGTCATGTCATAG	1197	0.4294	MPILARCDPVMGEEESKDLEVLGESEQAILLEDNDASNEACSSLPDEELVNQKRNSSEGTLPDQGSLTDDLKNQLDAKGRWTRYRVAKVSLLICPFWFFAQLTFNLSLKYTTVTSNTILSSASSPFTFLISLAILGEKFTWIKLFSVLLSTGGTIIVSLGDSQSGLSTIASNPLVGNILALVSAALYAVYITLIRKKLPDNDGKSGRASMAQFLEYLGLFNLFIFLPIALTLNFTKAEPFHSFTWKQLGLIIGKGGFLVNFVGTEFMSTCDKISEFCEVQWQDQNKSATCFCSVHYCNSFSXLLDNVQSDYLWAKAVLLTSTTVAMAGLMIQVPLAAIVDSLTGHAPGLLDCLGAVAVMIVFAGINIPSDAFKKSREASVELENECVNSTSQHSGVMS	398

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele42g0006	398	Pfam	Solute carrier family 35	107	222	IPR009262	GO:0016020\|GO:0022857\|GO:0055085
	Lele42g0006	398	MobiDBLite	consensus disorder prediction	34	68	-	-
	Lele42g0006	398	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	78	162	-	-
	Lele42g0006	398	PANTHER	SOLUTE CARRIER FAMILY 35, MEMBER F5	34	387	-	-
	Lele42g0006	398	MobiDBLite	consensus disorder prediction	36	68	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele42g0006	Lele-ChrLele42	48421	51399	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele42g0006	42	48421	51399	Lele43g1349	43	21540711	21545113	hybridization
	Lele42g0006	42	48421	51399	Lele44g1346	44	21587850	21590306	hybridization