Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1403 ATGCATCAGGTGCCGCGCGATGGAAAATGGAGAGAAGAAGATGCTTCGGTGCTGGTTCCTGGAGACATAATTAGCATCAAATTGGGAGACATCATTCCTGCGGATGCGCGTCTTCTGGAAGGAGATCCTCTGAAGATCGATCAGTCCGTGCTGACGGGAGAGCCACTGGCGGTGACGAAGAATCCCGGAGAAGGAGTGTACTCTGGTTCAACGTACAGGCAAGGTGAAATGGAAGCCGTAGTGATCGCGACTGCAGTTCACACATTCTTGGGCAAGGCGGCGCATCTGGTGGAAAGCACCAACAACATTGGGCATTTCCAGCAGGAACGAGCAGGAACAAAACAAGTTCACTTCCTTCCATTCAATCCAACGGATAAAAGAACTGCGCTTACATACATCGATGCTGCTGGTAAGATGCATCGGGTTAGCAAAGGTGCTCCAGAGCAGATTCTGAATTTCGCACATAACAAATCAGAAATCGAGCGAAAGATATGTGTGGTGTTGAACAAGAAAGCTAACATAGATAAAATCCTTATATCTGATTGA 546 0.478 MHQVPRDGKWREEDASVLVPGDIISIKLGDIIPADARLLEGDPLKIDQSVLTGEPLAVTKNPGEGVYSGSTYRQGEMEAVVIATAVHTFLGKAAHLVESTNNIGHFQQERAGTKQVHFLPFNPTDKRTALTYIDAAGKMHRVSKGAPEQILNFAHNKSEIERKICVVLNKKANIDKILISD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1403 181 Pfam E1-E2 ATPase 3 102 - -
Lele41g1403 181 Gene3D - 104 170 IPR023299 GO:0000166
Lele41g1403 181 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 97 155 IPR023299 GO:0000166
Lele41g1403 181 FunFam Plasma membrane ATPase 1 84 - -
Lele41g1403 181 Gene3D - 1 98 - -
Lele41g1403 181 PANTHER CALCIUM-TRANSPORTING ATPASE 109 172 - -
Lele41g1403 181 SUPERFAMILY Calcium ATPase, transduction domain A 3 97 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1403 Lele-ChrLele41 22279046 22282488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1403 107 172 Primary Pumps ATPases AT5G62670 72.727 7.28e-29 110