Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1359 ATGCCCTCTGGTGCAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCACGGCTAAAACTATGTTCAACTCTCCTGGCCTCTCACTTGCCCTTCAAACGGATATAGATGGGCAAAGGGATGGAAATAGAATGTCTGAGAATTACGAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCGAGAAAGCAGATCTGGAAGTGATAACTTGGAAGTCGCTTCCGGCGACGATCAAGATGCCTCCGATCACCCTCCCAGGAAAAAGCGCTATCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCTTTGTTCAAGGAGTGCCCTCACCCAGATGAGAAGCAGAGATTGGAACTGAGCAATAGGCTTTGTTTGGAAACGAGGCAAGTGAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAGCGCCATGAGAATACACTGCTTAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATGTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCAGCTATAATGGGAGAAATTTCACTGGAGGAACAGCATCTTCGGGTCGAAAATGCCCGGTTAAAGGACGAGTTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCCTTGGCCGCCCGGCATCTTCATATCCCAACTCAATGGCTCCCCCATTGGCAAACTCAAGTTTGGAGCTAGGAGTTGGAAGCAATGGCTTTGGGGGTATAAGCACTGTGCCTGCAACATTGCCCATGGGGCCTGACTTGGATGTGGGCATTTCTAGCCCTTTAGCTATGGGAACTCCTCATCCTGCTCCGGCGGCTCGACCGGCCGTGCTTGATAGATCGATAGAGAGGTCTATGTTTCTAGAGCTTGCTTTGGCAGCCATGGATGAGTTAGTGAAGATGGCTCAGACTGATGAGCCTCTGTGGATGAGGACTTTGGAAGGTGGAAGAGAAATCCTCAGCCATGAGGAGTACTCAAGGACTTTCATGCCTTGCATTGGCTTAAAACCTAACGGCTCTGTGTCTGAAGCCTCAAGGGAGACCGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTCTGATGGACTCGAATCGTTGGGCAGAGATGTTTCCTTGTATGATTGCAAGAACTTCCACCACTGAAGTAATATCTGGTGGAATAAATGGGACCAGAAATGGTGCTCTTCTACTAATGCATGCTGAGCTGCAAGTTCTATCGCCGTTGGTACCGGTTCGCGAGGTCAATTTCCTCCGGTTCTGCAAGCAGCATGCTGAGGGAATGTGGGCTATTGTGGATGTGTCCATCGAGACTGTCAGGGAAACTTGTAGGCGGCTTCCTTCAGGCTGTCTAGTTCAAGATATGCCTAATGGTTACTCCAAGGTGACATGGGTTGAGCATGCAGAATACGATGAAAGGCAAGTTCACGTGATGTACAGAGGCTTGTTAAGTTCAGGCTTGGCTTTTGGCGCCCAACGCTGGATTGCCACCCTCCAGCGTCAATGCGAATGCGTCGCCATTTTAATGTCATCATCACTTCCTTCACGAGACCATTCTGCGATTACTACCGGCGGGAGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCGTTTGTGCCTCGACGGTGCACAAGTGGAACAAGCTCAACGCCGGCGACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGCGTCGACGACCCAGGGGAACCGCCGGGGATCGTGCTGAGCGCTGCCACGTCGGTGTGGCTGCCGGTATCGCCGCAGCGGTTGTTCGATTTCCTCCGTGACGAACGGCTTCGGAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGATCACGGCAACTGCGTCTCCTTACTCAGAGCCAGCGCCACGAATTCGAGCCAGAGCAGCATGCTAATATTGCAGGAGACGTGCATAGACGCTGCGGGGGCGCTCGTGGTGTACGCGCCGGTGGATATCCCGGCGATGCACTTGGTCATGAACGGTGGCGATTCAGCTTACGTGGCGTTACTCCCGTCGGGGTTCGCGATTGTGCCGGACGGGTCAGGGTCGCGGGGGACCCAAACGCCGGTCGGGAACGGTGGGGGCAGAGCGAGTGGGTCACTCCTAACGGTGGCGTTTCAGATACTGGTGAACAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCAGTGGAGACGGTGAACAACCTGATATCTTGTACGGTGCAGAAGATAAAGGCCGCGCTCCCGTGTGAAAGCCGAGTCACGTGA 2340 0.5346 MPSGAISQPRLLTSTPTAKTMFNSPGLSLALQTDIDGQRDGNRMSENYEMNVNGRRSREEERESRSGSDNLEVASGDDQDASDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSNRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENMSIRDAMRNPICSNCGGPAIMGEISLEEQHLRVENARLKDELDRVCALAGKFLGRPASSYPNSMAPPLANSSLELGVGSNGFGGISTVPATLPMGPDLDVGISSPLAMGTPHPAPAARPAVLDRSIERSMFLELALAAMDELVKMAQTDEPLWMRTLEGGREILSHEEYSRTFMPCIGLKPNGSVSEASRETGMVIINSLALVETLMDSNRWAEMFPCMIARTSTTEVISGGINGTRNGALLLMHAELQVLSPLVPVREVNFLRFCKQHAEGMWAIVDVSIETVRETCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHVMYRGLLSSGLAFGAQRWIATLQRQCECVAILMSSSLPSRDHSAITTGGRRSMLKLAQRMTNNFCAGVCASTVHKWNKLNAGDVGEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASATNSSQSSMLILQETCIDAAGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFAIVPDGSGSRGTQTPVGNGGGRASGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCESRVT 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1359 779 CDD homeodomain 87 145 IPR001356 GO:0003677
Lele41g1359 779 CDD START_ArGLABRA2_like 293 513 - -
Lele41g1359 779 Coils Coil 139 171 - -
Lele41g1359 779 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 84 772 IPR042160 -
Lele41g1359 779 SUPERFAMILY Bet v1-like 291 514 - -
Lele41g1359 779 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Lele41g1359 779 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Lele41g1359 779 MobiDBLite consensus disorder prediction 52 68 - -
Lele41g1359 779 SUPERFAMILY Homeodomain-like 74 145 IPR009057 -
Lele41g1359 779 FunFam Homeobox-leucine zipper protein GLABRA 2 298 513 - -
Lele41g1359 779 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Lele41g1359 779 SUPERFAMILY Bet v1-like 535 762 - -
Lele41g1359 779 ProSiteProfiles START domain profile. 289 517 IPR002913 GO:0008289
Lele41g1359 779 FunFam Homeobox-leucine zipper protein HDG1 75 161 - -
Lele41g1359 779 SMART HOX_1 86 149 IPR001356 GO:0003677
Lele41g1359 779 SMART START_1 298 514 IPR002913 GO:0008289
Lele41g1359 779 MobiDBLite consensus disorder prediction 1 31 - -
Lele41g1359 779 MobiDBLite consensus disorder prediction 1 95 - -
Lele41g1359 779 Pfam START domain 298 514 IPR002913 GO:0008289
Lele41g1359 779 Gene3D - 74 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1359 Lele-ChrLele41 21984641 21989094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1359 16 776 Homeobox Transcription Factor Family AT3G61150 67.310 0.0 1028
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele41g1359 START 8.3e-49 CL0209