Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1356 ATGGAATCTGCAAATACTCTATTTTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACTACTGGTGGCCAGAGCCTGACCCAAGATACCCCTCAGCTTTACTGGCTGTGTATCACCTTCCTTGCTATCGACATTGTAATTCTTTTGATCTGTGTGGTTGTGGCATGCCTTGTTGGTATTGCTGTTTGCTGCTGTCTGCCATGCATACTTGCATTTTTGTCAGTGGTGGCGGATAAGGAAGGGGCAACCAAGGAAGAAATCAATCGGTTGCCGAAATACAAGTTCAGGAGGGCAGACGATGGTGATGATGCCCAAGCTTCATCTTGTAAAGGAATAGTGACAGAATGTGACAGCGATACCCCTGCAGAACATGTTCTTTCCACGGAAGTTGCAGAGTGCTACATCTGCCTGTGTCCCTATGAGGATGGAGCAGAGCTAAGAGAACTTCCCTGTAGCCACCATTTTCACGCGGAATGCATCGACAAGGGGTTGTACATCAACGCCAACTGTCCTCTCTGCAAGTTCAATGTTCATACGGGGAACCATTCACAAGTTTGA 561 0.4635 MESANTLFSFIWWLLGFYWITTGGQSLTQDTPQLYWLCITFLAIDIVILLICVVVACLVGIAVCCCLPCILAFLSVVADKEGATKEEINRLPKYKFRRADDGDDAQASSCKGIVTECDSDTPAEHVLSTEVAECYICLCPYEDGAELRELPCSHHFHAECIDKGLYINANCPLCKFNVHTGNHSQV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1356 186 PANTHER TARGET OF ERK KINASE MPK-1 2 181 - -
Lele41g1356 186 Pfam Ring finger domain 133 175 IPR001841 -
Lele41g1356 186 SMART ring_2 134 174 IPR001841 -
Lele41g1356 186 ProSiteProfiles Zinc finger RING-type profile. 134 175 IPR001841 -
Lele41g1356 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 181 IPR013083 -
Lele41g1356 186 SUPERFAMILY RING/U-box 88 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1356 Lele-ChrLele41 21972994 21974549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1356 2 185 C3H Transcription Factor Family AT1G68070 50.270 3.31e-64 199