Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1354 ATGAATATGATGCGACGGCTGAAGAGCATTGCTTCTGGGCGGACTTCCATTTCGTCAGATCCTGGAGGGGATTCTAACACCAAGAGAGCTAAGTTTGATCAAGAAACTGAAGGAAGAGTCAATGAGGAAACAAATCCTGTTGAGAGAGGCAGCACACATATGGAGCAACATGTTTGTGCGCCACGGGATACTACTGTAGGCACATCCAATGCATCCACAGTGGAGAGAACGGAGAAATCAGGTTATGATCAGCTTCCTAAAGAATTGAATGAAATGAAAATTAGAGATGAGAAAGGCAACAACCGCAATGAAAAGGATATGGAGCCAGCTATTGTGAACGGTAACGGAACTGAAACGGGGCAGGTAATTACTACAGCTATTGGTGGTCGTGATGGACAACCAAAGCAGACCATATCATACATGGCAGAGCGTGTGGTTGGTACCGGTTCCTTTGGTGTTGTTTTTCAGGCTAGGTGCCTTGAAACTGGTGAAACAGTTGCCATAAAAAAGGTTTTGCAAGACAAGAGATATAAGAATAGGGAATTACATGTGATGCGCATGCTTGACCATCCCAATGTTATTCAACTAAAGCACTGTTTCTTTTCAACTACTGAAAAAGATGAGTACCTGAACCTGGTTTTGGAGTATGTATCAGAAACCGTCTACAGAGTTTCTAAGCACTATATCAGAATGCATCAACACATGCCTATAATTTATATACAGCTGTATACATACCAGATATGCCGTGCATTAAACTATCTACATCATATACTTGGCGTCTGCCACCGTGATATCAAACCACAGAATTTATTGGTTAATCCCCATACTCATCAGCTAAAGATCTGTGATTTTGGAAGTGCAAAGATACTGGTGCCTGGTGAACCCAACATATCATATATATGCTCACGGTATTATAGAGCACCTGAACTCATATTTGGGGCAACTGAATACACAAATGCTATTGATATGTGGTCTGTCGGTTGTGTTTTGGCTGAGCTCCTTCTAGGACAGCCAATGTTCCCTGGGGAGAGTGGAGTTGATCAGTTGGTGGAAATCATCAAGATATTGGGGACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACTCTGAATTCAAGTTTCCTCAGATTAAAGCACACCCATGGCACAAGGTTTTCCACAAGAGAATGCCTTCTGAAGCTGTTGATCTTGTATCAAGGCTGCTCCAGTATTCACCAAATCTACGTTGCACTGCTTTGGAAGCATGTGCACACCCCTTCTTCAATGATCTAAGAGACCCAAATGTATCCTTGCCGAACGGGCGACCTCTGCCTCCTTTGTTTGACTTTACAGCACAAGAGTTGGCTGGTGCACCTGCCGAGTTGCGTCATCGTCTCATTCCCGAACATGCAATTAGCCGAATTGATTATCAGAGTCATCAATTACATAAGTAG 1440 0.4299 MNMMRRLKSIASGRTSISSDPGGDSNTKRAKFDQETEGRVNEETNPVERGSTHMEQHVCAPRDTTVGTSNASTVERTEKSGYDQLPKELNEMKIRDEKGNNRNEKDMEPAIVNGNGTETGQVITTAIGGRDGQPKQTISYMAERVVGTGSFGVVFQARCLETGETVAIKKVLQDKRYKNRELHVMRMLDHPNVIQLKHCFFSTTEKDEYLNLVLEYVSETVYRVSKHYIRMHQHMPIIYIQLYTYQICRALNYLHHILGVCHRDIKPQNLLVNPHTHQLKICDFGSAKILVPGEPNISYICSRYYRAPELIFGATEYTNAIDMWSVGCVLAELLLGQPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYSEFKFPQIKAHPWHKVFHKRMPSEAVDLVSRLLQYSPNLRCTALEACAHPFFNDLRDPNVSLPNGRPLPPLFDFTAQELAGAPAELRHRLIPEHAISRIDYQSHQLHK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1354 479 MobiDBLite consensus disorder prediction 1 55 - -
Lele41g1354 479 ProSiteProfiles Protein kinase domain profile. 140 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1354 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele41g1354 479 SUPERFAMILY Protein kinase-like (PK-like) 139 448 IPR011009 -
Lele41g1354 479 Gene3D Phosphorylase Kinase; domain 1 125 218 - -
Lele41g1354 479 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 104 466 - -
Lele41g1354 479 MobiDBLite consensus disorder prediction 9 25 - -
Lele41g1354 479 SMART serkin_6 140 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1354 479 Pfam Protein kinase domain 140 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1354 479 FunFam Shaggy-related protein kinase kappa 219 467 - -
Lele41g1354 479 CDD STKc_GSK3 135 426 IPR039192 -
Lele41g1354 479 ProSitePatterns Protein kinases ATP-binding region signature. 146 170 IPR017441 GO:0005524
Lele41g1354 479 FunFam Glycogen synthase kinase-3 beta 124 218 - -
Lele41g1354 479 Gene3D Transferase(Phosphotransferase) domain 1 219 467 - -
Lele41g1354 479 MobiDBLite consensus disorder prediction 26 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1354 Lele-ChrLele41 21965391 21969735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1354 140 450 MAP Kinase Gene Family AT1G73670 36.697 7.87e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Lele41g1354 Pkinase 3.3e-66 CL0016