Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1314 ATGGGGATTCAGTGCTCCAAACTCATGCCGTGTTGTGTGAATTCTCAAGTAAAGGCTTCCGTTCTTGAAGCTCCAGATAATGAAAAGGAGGATAGAAGTGAGGCCAGTAACTGGCCTGCATTCCGTGAATTTTCATTGGAGCAACTAAAGAATGCAACATCTGGTTTTGCTGTTGAGAATATTGTATCTGAACATGGAGAAAAGGCGCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATAGCTGTTAAGCGCTTTAATAGAAATGCTTGGCCTGATGGCCGACAGTTTTTGGAGGAAGCAAGATCTGTTGGTGAGCTCCGCAACCAGCGATTAGCAAATTTGATTGGTTGTTGTTGTGAAGGTGATGAGAGGCTGCTTGTGGCAGAATTTATGCCTAATGAAACACTGGCAAAACACCTTTTCCATTGGGAAACTCAACCTATGAAATGGGCAATGCGACTAAGAGTTGTGTTCCATCTTGCCCAAGCTCTAGAATATTGCACAGGAAAAGGACGAGCCCTCTATCATGACCTTAATGCATACAGAGTTTTATTTGATGAGGAGGGCAATCCTAGGCTTTCAACTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACAAATTTGGCTTTTACCCCTCCAGAATATCTGAGAACTGGGAGAGTAACACCAGAAAGTGTAATATATAGTTTTGGCACTCTTTTGCTTGACCTTCTCAGTGGGAAGCATATCCCCCCAAGCCATGCCCTTGATTTAATTCGGGACAGAAATCTTCAAATGCTGACAGATTCTTGTTTGGAAGGACAATTTTCTGATGATGATGGAACTGAGTTGGTACGCTTGGCATCTCGATGCTTACAGTATGAGCCTAGAGAAAGGCCAAATCCTAGATCATTGGTGGCTGCCTTGGCTCCTCTTCAGAAAGATACAGAGGTTTCTTCACATGTCTTGATGGGAATCCCACATGGTGATGCTACTTTTGCTTCGTTGTCCCCACTTGGTGAAGCATGCTCGAGAAAGGATTTGACTGCCATACATGAAGTTCTGGAAAATATGGGCTATAAAGACGATGAGGGAGTGACAAACGAGTTATCGTTCCAGGTTTGGACTGATGAAATGCAGGAAACACTTAACAGTAAGAAAAAGGGGGATGTTGCTTTCCAGCAGAAGGATTTTAGAGTTGCAATAGAGTGCTTCACACAGTTCATTGATGGTGGAATAGTGGTTTCTCCAACGGTCTATGCGCGGCGAAGTTTGTGTTATCTCGTCGGCAACATGCCTCAGGAAGCACTGAACGATGCCATGCAGGCACAATTCATATCCCCTGTATGGCACATAGCATCATATCTTCAATTTCTTGCCCTCACTGGACTTGGCATGGAGAATGAAGCTCAAGTAGCACTTAAAGAGGGCACAGATTTGGAAGCCAAGAGAAGTGGAACTTCTGGGCATAAATGA 1479 0.4368 MGIQCSKLMPCCVNSQVKASVLEAPDNEKEDRSEASNWPAFREFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDGRQFLEEARSVGELRNQRLANLIGCCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWAMRLRVVFHLAQALEYCTGKGRALYHDLNAYRVLFDEEGNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPRSLVAALAPLQKDTEVSSHVLMGIPHGDATFASLSPLGEACSRKDLTAIHEVLENMGYKDDEGVTNELSFQVWTDEMQETLNSKKKGDVAFQQKDFRVAIECFTQFIDGGIVVSPTVYARRSLCYLVGNMPQEALNDAMQAQFISPVWHIASYLQFLALTGLGMENEAQVALKEGTDLEAKRSGTSGHK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1314 492 FunFam probable serine/threonine-protein kinase At4g35230 381 489 - -
Lele41g1314 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Lele41g1314 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Lele41g1314 492 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Lele41g1314 492 SUPERFAMILY TPR-like 387 482 IPR011990 GO:0005515
Lele41g1314 492 SUPERFAMILY Protein kinase-like (PK-like) 34 317 IPR011009 -
Lele41g1314 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 17 486 IPR045845 GO:0004672|GO:0009742
Lele41g1314 492 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1314 492 Gene3D Tetratricopeptide repeat domain 381 489 IPR011990 GO:0005515
Lele41g1314 492 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Lele41g1314 492 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1314 Lele-ChrLele41 21766850 21771116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1314 10 331 Glycoside Hydrolase AT3G07070 33.714 4.57e-44 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele41g1314 PK_Tyr_Ser-Thr 1.7e-26 CL0016