Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1306 ATGCTGCCTTTTGAATCCTCTCAATTTCAGACTGTGGTGTGTTTTCCCTACCTAGGAGGCGTTATCGAGATAGGCACAACCGAGCTAGTCCCAGAGGACCCTAATCTCATCCAACACGTCAAAACTTGCTTCTTAGAATTCTCAAAGCCTATCTGCACTGAAAAACCTTCCTCTGCACTTAACAAAGAAGATGAAGATCAAGATCCAAAATGCACCAAGGTTGATGCTTGGACAATGAATGATTATGATACAATGATTATACTACAAGAAGATAACAATGAAGAGCTTCACATGGATTCTTCTGATGAATGTTGTAATGGTTGTGACCATCACTGTCAGGTTGAAGACTCCATGTTTGAAGATTCCTTGAGTTCTGGGGATTGTATATCTGAATTGCTTGAGAAGCAAGCCATGGTAGTTACAAATGCATATGAAAGTCAGTTAAGACTAACTGAACTTCTTCATGACTGCAATCACTCAAAACTTAGTTCCTTGGAGATTGGAACCACCATTGAAGACTTGCACTGCACAAGAACTCTCAGTGCTCTTTTGGGAAACTCTTTGACGATATGCTTCTCTTCCAAGTCACCAAAACAACATGATATAAAAGAATTTCACAGAAAATTGGACGGTGATTATCACTGTGTGATGAAGGATTTATCTGATGAAAGAAGAGAAAGTAAAAAGTATCAGATTCTCAAGTCTATGTTCCCTTCTATAGACGAGGTGGACAAGGTTTCAATCCTCAATGACACGATCAAATACATGAAAGAGCTTGAGGCAAAAGTGGAAGAACTAGAATCTTGCATGGACATTGCAGATTCTGAAACCAGAATGAGAAGCTCATCAGAAGTTATGGAGCAGACATCAGGAAAGTTTCCAAAGCAAAGAAACCTCAGATGA 903 0.3942 MLPFESSQFQTVVCFPYLGGVIEIGTTELVPEDPNLIQHVKTCFLEFSKPICTEKPSSALNKEDEDQDPKCTKVDAWTMNDYDTMIILQEDNNEELHMDSSDECCNGCDHHCQVEDSMFEDSLSSGDCISELLEKQAMVVTNAYESQLRLTELLHDCNHSKLSSLEIGTTIEDLHCTRTLSALLGNSLTICFSSKSPKQHDIKEFHRKLDGDYHCVMKDLSDERRESKKYQILKSMFPSIDEVDKVSILNDTIKYMKELEAKVEELESCMDIADSETRMRSSSEVMEQTSGKFPKQRNLR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1306 300 Gene3D - 223 290 IPR036638 GO:0046983
Lele41g1306 300 SMART finulus 220 265 IPR011598 GO:0046983
Lele41g1306 300 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 273 IPR036638 GO:0046983
Lele41g1306 300 MobiDBLite consensus disorder prediction 277 300 - -
Lele41g1306 300 PANTHER TRANSCRIPTION FACTOR TT8 4 290 - -
Lele41g1306 300 Coils Coil 249 276 - -
Lele41g1306 300 MobiDBLite consensus disorder prediction 282 300 - -
Lele41g1306 300 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 44 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1306 Lele-ChrLele41 21737088 21738477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1306 5 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 30.312 8.27e-27 108