Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1301 ATGCAGGAGGGTCCCACGCTCCTTCAGGGAAGTTTCGTCCCGAAGGAATTGGAGGGAGCAAGAAGAAAGCCAGAGGAGAAGAGACAAGTGGGTCGTTTTGAGGTTGAAAGGGAGGAGGACCCCACTGGAACTGTTTATGTAATTTACCTTTCAAAGGCTATGGCGAGTCCTGTGCTGGCAATGCCACGAAGTTTCAGTTCTGTGAGGTTGCATCAAGATTTTGGGGTCACCGGCGGCCACATGGCCGGGATGGGAGAAATTGTAGAAGAGCCTAAAACAAGTGTGGTTGATGATGACACTATCTATGTTTCTGTGACAAAAGATTTGAAAGAGAGCAAGTCAAATCTGACATGGGCAATTCAAAACTTTGGAGGAAACAAGATTTGCATCCCCCATCATGGGATCCGTAAGCTTGTCATGGGGGCAGCATCTGATAATCGTCATTCTAGAAATCGCTGCTTGGATGATGGTAATGAAGAGGCTGAATCACCTTTGCCACAGCAGAGGCCAAACCCTGAAGCTGTGCATTCACTTCAGTTGAGGTTTCAATCCGTTACGATGTGGCAGAATAATAGGGAAAAGCTTGAGATACTTCCCAGAGCAAGGTCTGCAATTTCTGGGCATGAAGGAAGAACAGTGACCTTTTCTTCTCCAGATCCTGAAGGGTTTTCAAGTCCAAGTAACAGATGGGGTACAGAAGTTAGTACTAATGTATCAGATAGGGGGTTAAGAAAGAGTCCTTCAGTTTTCTCAACATGTTCTGAAAATGCATTGACTCCAAAATTGATTTTTGAGAATGTAATAGACTCAAGTGAATTCTCTCCAGTTATAGCAAGTCTCCGTCGTTCCTCTCCTCCTAGTGTACTGGATGGAGGAATGGATGAATCTCTCTACTATCACCTTCAACAAGCCATGTCTGAAGCTGAGAATGCTAGACGGGAGGCCTTTCAAGAAACACTTAAGCGTGGGAAAGCTGAAAAAGATGCACTTGATGCAATGCGAAGGGCTAAAGCCTCTGAAAGCTTGTATAAAGAAGTACTCAAACAAAGGAAACAAGCTGAGGAAGAACTAGAAAAAGAAAGAGGAGAACTTGAGGGGAAGAAGAGCGAGAGAGACAAAGTTAAGGAAGAACTTAGACTTGCCCAAGATCAAAAGCTGTCTTTGGAGAGGCAAATTGAATCATCTGAATTCATGGTAAGAGAGTTAGAACAGAAGATCATATCTGTTGTGGATCTGTTGACAATGTACAAGAAAGAAAGAGACGAGTTACAGATGCAGCGCAATGATGCATTGAAAGAAGCCGAGGAGTTGAGGAAAAAACAAGGAGAGGTTTCAAGAGTACGGGGGCCTGTTGAGTCGTTTTCAGAGTTCTCTTTTCAAGAGATTGAACAAGCAACAAGGAACTTCAATTCATCCCTAAAGATTGGAGAAGGAGGATATGGAAATATCTATAAAGCTACCTTGCGTCAAACCGAGGTGGCCATAAAGATGTTGCATGCAAACAACAACTCGCAAGGACCCGCAGAGTTTATGCAGGAGGTTGATGTATTGAGTGGTGGTGGTGATGCCACAGATTGTTGGAGAACTGTTCCTAAGGGTACTTTAGCCTACATGGATCCCGAATTTCTCGCTACCGGCTATCTCACGCCGAAATCAGATGTTTATTCATTTGGAATCATATTATTAAGATTGTTGACTGGGAGACCAGCCTTGGGGATAACAAAGGAAGTGCAATATGCATTAGACACTGGAAAGTTTAAATCCCTGTTGGATCCTTTGGCTGGAGATTGGCCATTTGTGCAAGCTCAACAGTTGGCTCGTGTGGCTTTAAGGTGTTGTGAGTTGGCTCGAAAGAATCGGCCGGATATTCGTTCAGATGTCTGGAAAATTCTGGAAGCAATGAGTGCTTTTTCTGGAGGCACAGACTCCTTTAAACTAGCTTATGGAGGCTCTGAGCAACCTCCTTCAAAATTCTGGAAGCAATGA 1986 0.4406 MQEGPTLLQGSFVPKELEGARRKPEEKRQVGRFEVEREEDPTGTVYVIYLSKAMASPVLAMPRSFSSVRLHQDFGVTGGHMAGMGEIVEEPKTSVVDDDTIYVSVTKDLKESKSNLTWAIQNFGGNKICIPHHGIRKLVMGAASDNRHSRNRCLDDGNEEAESPLPQQRPNPEAVHSLQLRFQSVTMWQNNREKLEILPRARSAISGHEGRTVTFSSPDPEGFSSPSNRWGTEVSTNVSDRGLRKSPSVFSTCSENALTPKLIFENVIDSSEFSPVIASLRRSSPPSVLDGGMDESLYYHLQQAMSEAENARREAFQETLKRGKAEKDALDAMRRAKASESLYKEVLKQRKQAEEELEKERGELEGKKSERDKVKEELRLAQDQKLSLERQIESSEFMVRELEQKIISVVDLLTMYKKERDELQMQRNDALKEAEELRKKQGEVSRVRGPVESFSEFSFQEIEQATRNFNSSLKIGEGGYGNIYKATLRQTEVAIKMLHANNNSQGPAEFMQEVDVLSGGGDATDCWRTVPKGTLAYMDPEFLATGYLTPKSDVYSFGIILLRLLTGRPALGITKEVQYALDTGKFKSLLDPLAGDWPFVQAQQLARVALRCCELARKNRPDIRSDVWKILEAMSAFSGGTDSFKLAYGGSEQPPSKFWKQ 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1301 661 MobiDBLite consensus disorder prediction 147 172 - -
Lele41g1301 661 ProSiteProfiles Protein kinase domain profile. 262 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1301 661 Coils Coil 336 405 - -
Lele41g1301 661 Coils Coil 301 321 - -
Lele41g1301 661 Gene3D Transferase(Phosphotransferase) domain 1 519 643 - -
Lele41g1301 661 MobiDBLite consensus disorder prediction 16 31 - -
Lele41g1301 661 Pfam Protein kinase domain 529 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1301 661 Gene3D Phosphorylase Kinase; domain 1 438 518 - -
Lele41g1301 661 SUPERFAMILY Protein kinase-like (PK-like) 459 625 IPR011009 -
Lele41g1301 661 Coils Coil 413 440 - -
Lele41g1301 661 ProSitePatterns Protein kinases ATP-binding region signature. 475 496 IPR017441 GO:0005524
Lele41g1301 661 MobiDBLite consensus disorder prediction 210 241 - -
Lele41g1301 661 Pfam Protein tyrosine and serine/threonine kinase 473 518 IPR001245 GO:0004672|GO:0006468
Lele41g1301 661 MobiDBLite consensus disorder prediction 1 31 - -
Lele41g1301 661 PANTHER OS02G0152300 PROTEIN 528 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1301 Lele-ChrLele41 21690761 21696717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1301 494 658 U-box Gene Family AT2G45910 51.381 6.12e-50 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele41g1301 Pkinase 9.2e-08 CL0016