Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1287 ATGGTGACTCTTGGCGATAAGTCATGGTTGAGGAGTAAGACGATGACTCTTAGCGGGGTGACTCCTGCTGGCAAAGAAGATGCAAATTCTTCCGACAGAGGCAGGAAGCTGCAAGAGAACCGTGTTCTGTTGAGAGGAAACGAGACTTTACCCAGTGAGAATCGGACATTCGAGCTTGGTTTCTTCATCTTCAATGGCGGTGAACCCAATTATTACTTGGCCATTCGGTATGCGTCGGTTACGCTTCCCACCTACGTCTGGGTAGCGAATCGCGAAAAACCCAGCAAAAATCTCGCCGATTCGACGCTGGAAATCACTGAAACTGGCCTCCTTCTTGTGAAAGATTCACCAACCTCGATTCTTTGGCAGAGTACGGATTTGGAAACTTCAGGAGCAGAAGAAGTAAAGCTTTTAGACAGTGGGAATTTGGTTCTGCTCACTCGTCAAGGCTCTGTTTCATGGCAGAGCTTCGATTTCCCTACGGACGCTTGGCTTCCGGGTATGAATCTGACCCGGGCCCGATCCTTGGTGTCGTGGCGGAGCCCCACGGACCCGTCGCCGGGACTCTATTCTCTGCGGCTGAAACCGCCTGGCTACGGTGAGTTCGAGCTTCTCTTCGGTAACTCCAAATCTTATTGGAGCACCGGAAGGTGGACCGGTGACTCGTTCCTCAACATTCCGGAGATGATGATTCCGTACCTATATCTCTTCGACTTCGCAAATCCATTCACACCAACGGCGTCGTTTGGGTTCATGGAGAAGCCTCTGAACGGGCTGAGCCCGCCCACGTATTTCCGCGTCGAACCGTACGGGCAGGAGTCTGCAATGGCGAAACTACGCCAAAGTGCGAGTGCATCTCCGGTTAGGTTCGACAGAAACTACGCGAACGGGCTGAGCCCGCCCACGTATTTCCGCGTCGAACCGTACGGGCAGGTTCGACAGTACACGTGGGGTTCTCAGGCTGGAAGCTGGAACATTTTCTGGTCGGGGCCGAAAAATGTGTGGGACGTTCATGGCCTGTGTGGTAGCTTAGGAGTCTGCAATGGCGAAACTACGCCAAAGTGCGAGTGCATCTCCGGTTACAAGCCCTTAGTCGACGGCAGATGGACTTCCAGAGATTACTCCGGTGGGTGCCGTCGGGAAACCGATAGTCCCTGCGATAAAAGTGATGGGTTCGAGGATATGGGCGTTATGAGCTTCGTAGCACCCAATGTGCGGTTGTTTCAAACCAAGTCTCGAAGCAATTGCGAGACTAATTGTTTAAGTTCATGCGATTGTATTGGCTTATCTTTCAATCCAAGGACCAGTGGCCAGAACTTTTACGGGTCAATTCTGAATCTCCATAATTCATCTTCTGAAAACTCTGTTGATGGCAATTTGTATGTTAGGGTACAACGAGGAGGATCTGTGAAGAAACTGGATCGTCAAATTCTGACTGGCACTATCATTGGAGCAATTCCTTTGCTTGGGTTAATAGTGGCGACATTGTTGGTATTGCTGAATCGAAGGCGGAAGAAGAAGAAACTAGAAGAAGATGGATTGATTCATGTTCTGAATCTTCAGTTATTTTCCTACAAAGAGCTTCAATTAGCGACTCGGGGATTCTCAGAGAAGGCGGTTCATGGGGGGTTCGGGGCAGTATTTCAGGGAGAATTACCAGATTCAACTCTCTTAGCCGTGAAGCGACTGGAGAGACCAGGTGTTGGAGAACAGGAATTCAGAGCAGAAGTTTCCACCATTGGCAATATCCAACATGTTAATCTCGTTAGACTCAGAGGGTTTTGCTCAGAAAATTCTCACAGACTTCTGGTTTACGAGTTCATGCCCAACGGCGCTCTTAGTTCTTACCTTCGCAAAGAAGGAGGGCCAAGTCTGAGTTGGGATGTTAGGTTCCGAATAGCCGTAGGAACAGCCAAAGGCATAGCTTACTTGCACGAAGAATGTCGAGATTGTATCATTCACTGTGATATCAAACCTGAAAATATCCTCTTGGACACCAATTTCACGGCCAAAGTTTCTGACTTTGGATTAGCGAAGCTCATGGGGAGGGATTTCAGTAGGGTTTTAGCAACCATGAGAGGCACTTGGGGGTATGTAGCACCAGAGTGGATTTCTGGGGTAGCAATCACCACAAAAGCTGATGTTTACAGCTACAGGATGACATTGTTAGAGCTGATCAGTGGTCCCAGGAATGTGGAGGCACCGCCACAATCAGGTGGTGGCGCCGAGGAGGCCGGAGAGAAAGAGAAATGGTTCTTCCCTCCGTGGGCTGCACGGCAGATAATTGAAGGGAATTGGACTGCAATACTTGACAAGAGACTTGGGAATGCTTATAGAATGGAGGAGATAAAGAGGGTGGCTATGGTGGCTGTGTGGTGCATTCAGGATGATGAAGGAAGTAGGCCTGCCATGGGGATGTTAGTGAAGATGTTGGAGGGGTTTGTGGAAGTAAGTGTCCCTCCGACGCCTAAATTGCTTCAAGCATTGGTATACGGCGAGTCATTCCTAGGTGTGAAGGCAGGTTCCGGCACAGGCAGCAGTCTCTCCGGTGGCAATGCTGATTCAGAATCATTTACAGGGGGTGTTTCTTCCCCAGCAAATATGAATGTCAACGTTGTTGTACAATGA 2628 0.4947 MVTLGDKSWLRSKTMTLSGVTPAGKEDANSSDRGRKLQENRVLLRGNETLPSENRTFELGFFIFNGGEPNYYLAIRYASVTLPTYVWVANREKPSKNLADSTLEITETGLLLVKDSPTSILWQSTDLETSGAEEVKLLDSGNLVLLTRQGSVSWQSFDFPTDAWLPGMNLTRARSLVSWRSPTDPSPGLYSLRLKPPGYGEFELLFGNSKSYWSTGRWTGDSFLNIPEMMIPYLYLFDFANPFTPTASFGFMEKPLNGLSPPTYFRVEPYGQESAMAKLRQSASASPVRFDRNYANGLSPPTYFRVEPYGQVRQYTWGSQAGSWNIFWSGPKNVWDVHGLCGSLGVCNGETTPKCECISGYKPLVDGRWTSRDYSGGCRRETDSPCDKSDGFEDMGVMSFVAPNVRLFQTKSRSNCETNCLSSCDCIGLSFNPRTSGQNFYGSILNLHNSSSENSVDGNLYVRVQRGGSVKKLDRQILTGTIIGAIPLLGLIVATLLVLLNRRRKKKKLEEDGLIHVLNLQLFSYKELQLATRGFSEKAVHGGFGAVFQGELPDSTLLAVKRLERPGVGEQEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMPNGALSSYLRKEGGPSLSWDVRFRIAVGTAKGIAYLHEECRDCIIHCDIKPENILLDTNFTAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYRMTLLELISGPRNVEAPPQSGGGAEEAGEKEKWFFPPWAARQIIEGNWTAILDKRLGNAYRMEEIKRVAMVAVWCIQDDEGSRPAMGMLVKMLEGFVEVSVPPTPKLLQALVYGESFLGVKAGSGTGSSLSGGNADSESFTGGVSSPANMNVNVVVQ 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1287 875 Gene3D - 31 157 IPR036426 -
Lele41g1287 875 Pfam S-locus glycoprotein domain 302 363 IPR000858 GO:0048544
Lele41g1287 875 ProSiteProfiles Bulb-type lectin domain profile. 35 158 IPR001480 -
Lele41g1287 875 ProSiteProfiles Protein kinase domain profile. 533 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1287 875 SMART blect_4 41 160 IPR001480 -
Lele41g1287 875 Pfam Protein kinase domain 541 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1287 875 SUPERFAMILY Protein kinase-like (PK-like) 516 812 IPR011009 -
Lele41g1287 875 CDD B_lectin 41 160 IPR001480 -
Lele41g1287 875 PIRSF SRK 12 859 IPR024171 GO:0004674
Lele41g1287 875 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 218 IPR036426 -
Lele41g1287 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Lele41g1287 875 SMART serkin_6 535 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1287 875 Pfam D-mannose binding lectin 84 173 IPR001480 -
Lele41g1287 875 CDD STKc_IRAK 542 814 - -
Lele41g1287 875 FunFam S-receptor-like kinase 5 608 820 - -
Lele41g1287 875 Gene3D Phosphorylase Kinase; domain 1 497 607 - -
Lele41g1287 875 FunFam S-receptor-like serine/threonine-protein kinase 502 607 - -
Lele41g1287 875 Gene3D Transferase(Phosphotransferase) domain 1 608 819 - -
Lele41g1287 875 PANTHER OS07G0415500 PROTEIN 29 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1287 Lele-ChrLele41 21590493 21593964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1287 523 821 Receptor kinase-like Gene Family AT5G20050 44.373 6.17e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele41g1287 Pkinase 5e-40 CL0016