Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1284 ATGAAAAGTCCAACTTCCCATTCACGTCGCCGAAGCTCCGGCTCCGTCTACCGCACGCCAGACCACCGCAACTTCTACTCTCCCAGCTATGATTCCTCCGGGGTTAGCACCACCATCGTCAAGTCAAACTCCTCTAGGAAGCCATTAGCGGCTGCCGCTAGATCAGTGGCTGCGGTTTTTGTTGCTTGCTTCACCCCACCGGATGAGAGTAACTCGAAGAGCTTCGTGGATTCTCAAGAGTTCAAAGCTTCATCTTCCTCCTCCGTTGTATCTGATTCTTCGGGAGCTGGTAGTCAGAGAACGCATGGTTCAAATAGACGAATCAGTTCCAGTTCATACAAGTCAACTCAGGGAAAAGGGCCTAGATCTCTGAATTTCACCATTGAGGATATCTTCCAAGCCACAAGAAACTTCTCCCCCGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCAAGTTTCCCGGACGGAACTGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTATATGAGAAGCATTCGGGTTCTGAGTTCCAAAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAATTTGGTCAAGTTCTATGGATATTTGGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTTTGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTTGTGGGAAGATTTTGGACCTCGCTTCTCGTCTAGACATCGCAATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTCTTACTGAAAATTTTCGAGCTAAGGTAGCAGATTTTGGTTTTGCGAGACAGGCACCTGACAGTGATTCTGGTGTGACTCATGTATCCACCCAAGTTAGAGGAACCGCCGGCTACTTGGATCCTGAATATCTAAGAACCTATCAACTTACTGAGAAGAGTGATGTCTATTCATTTGGCGTTTTACTTGTTGAACTTGTCACCGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGCGAATCACTGCAAAATGGGCTATGAAGAGATTCATTGAGGGCGATGCCATATCACTGTTGGACCCGAAACTAGATCAGAATGCTGCAAATAATCTGGCGCTAGAAAAGATACTTGAACTGGCCTTGCAGTGTTTGGCACCTCGAAGACAAAGCAGGCCTGTTATGAAGAGATGTGCTGAGATCCTTTGGACCATCCGTAAGGATTACAGAGAGCTATCAGCTTTAGATTTTCGTTCATTTTCCTCTTCTTCCCAGAGGATTGCATCAGTAAAAGAGTGA 1332 0.4497 MKSPTSHSRRRSSGSVYRTPDHRNFYSPSYDSSGVSTTIVKSNSSRKPLAAAARSVAAVFVACFTPPDESNSKSFVDSQEFKASSSSSVVSDSSGAGSQRTHGSNRRISSSSYKSTQGKGPRSLNFTIEDIFQATRNFSPAYKVGQGGFGTVYKASFPDGTVVAVKRAKKSLYEKHSGSEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEFVPNGTLREHLDCICGKILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGVTHVSTQVRGTAGYLDPEYLRTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFIEGDAISLLDPKLDQNAANNLALEKILELALQCLAPRRQSRPVMKRCAEILWTIRKDYRELSALDFRSFSSSSQRIASVKE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1284 443 MobiDBLite consensus disorder prediction 86 121 - -
Lele41g1284 443 Gene3D Phosphorylase Kinase; domain 1 98 215 - -
Lele41g1284 443 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Lele41g1284 443 ProSiteProfiles Protein kinase domain profile. 138 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1284 443 MobiDBLite consensus disorder prediction 8 47 - -
Lele41g1284 443 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Lele41g1284 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Lele41g1284 443 SUPERFAMILY Protein kinase-like (PK-like) 120 416 IPR011009 -
Lele41g1284 443 CDD STKc_IRAK 144 413 - -
Lele41g1284 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 216 426 - -
Lele41g1284 443 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 101 215 - -
Lele41g1284 443 MobiDBLite consensus disorder prediction 1 47 - -
Lele41g1284 443 Pfam Protein kinase domain 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1284 443 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1284 443 PANTHER OS01G0750732 PROTEIN 34 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1284 Lele-ChrLele41 21575074 21577420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1284 92 417 Receptor kinase-like Gene Family AT1G30570 41.718 4.40e-70 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lele41g1284 Pkinase 4.6e-49 CL0016