Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1273 ATGATATCACCTAAAGGCTCTCAAATGTCCCCCAAACTTCTTGAAATATTAAATTCTTTCGAGGCAACACTGGCAGTGAGGCTGAAGAAGCTTATGCCAAAAAACAAGGATGAAATTCTCAGTATATCTTGGATGACTCTAGCAATGGAATCACTTTGTAAAACTCACAATAATATAAAAACCCTTGCCATAGAAATTGCACTCCCTCTGAGTGAATGGGATGAAAAATGGATTGATGTATACTTAGACATAAGTGTAAAGTTGCTAGATATATGCATTGCATTTAGTTCTGAGCTCTCACGCCTGAACCAGGGGCATCTTTTGCTTCAGTGTGCGTTACACAATTTAAACACTCCCTCCCCACAGCAGATTGTTCGAGCATGTTCTTCAATCGATGGATGGAGGCATCATATTAGTTCTAGGAATCCTAGGATTGACAAATGTGGAACCATTTTAGATAATCTTCTGGGATCACTTGATTTGCCAAAGGTTAAGAATTCAGCTAAAGGGAAGGTTTTGATGCAAGCTATGTATGGAGTGAAGGTGCAGACAGCATTTTTATGCAGTGTGTTTGCTGCGGTTTTCTCAGGCTCTGCAGAGAAGTTGTTTGATCGGAATGTGGCTGACACATATTTGTGGGCTCAAGCTTTTACAAGTTTGCGGCATGTTGTAAATGAGGAAATTGAAGTTAGATTTTCCAACAGAAGATTTGCTGTATTGAAGGAGTTGGAAGCAGTCGATGCCTTTGTGAAGAAATTATACCCTATAATCCAGGGTGAACAAGATACTGTTGAGACAGAAGCTCTTCTGAAGACTGTTGAGGAAACAAGCAAAGCGGCAGAGAAGCTTTCACAAGGATTAGATAATCTTGCAAAGGAAGTGGATGGTTTTTTCCGAGTAGTCTTATCTGGTCGTGACACTTTGCTATCTTCTCTGAGGTCAGGTTATGTTACAGTGCTGTTGAGGGGAAATGTATATGGTTGCGAAATCTCTTGGGCGAAGTTCGGCAACCTCGAACCAAATTCAATCCCAGTATCTATTGGGGTTTATAGGGTTGCTGAAATTCCTGCAAGAGTTAGTGAATCCGGTAAGTACCTTGTGCGATGTTTCAGAATCGGACCTCTCAAGCAAAGTTCTCAAGACATGTCTTTTGAATCACTCTCTGCTTCAGCCGAGCACAAAGGGTTGCCCACTCATGGTGGTCGCTACATTCAGTACAATGTGTACGGAAACCTATTCGAGGTTTCGAGAAAGTACGTGCCTCCTCTTCGGCCTGTTGGCAGAGGTGCTTACGGTCTTGTTTGTGCTGCTGTAAATGTTGAGACACGTGAGGAAGTTGCGATTAAGAAGGTTGGCAATGCATTCGACAACAGAATAGATGCCAAAAGGACCTTACGCGAAATTAAACTGCTTCGGCATATGGATCATGAAAATATCATGGCCCTCAAAGACATCATTCGACCTCCACAGAAGGAGAATTTCAATGATGTGTACATTGTATCTGAGTTAATGGACACTGATCTGCACCAAATAATACGTTCCAATCAACCGTTGACCGCTGATCATTGTCGGGTTGGCACTTCAACTATTTGTTTTGGCTTCAATTTGTTCTTGAATGCCAATTGTGACCTTAAGATTGGAGACTTTGGGCTTGCCAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTAACTCGATGGTACCGGGCTCCGGAATTGCTTCTTAATTGTTCAGGATATACTGCTGCCATCGACATATGGTCTGTTGGTTGTATCCTTGGTGAAATCATGACAAGAGAACCCCTCTTCCCTGGCAAAGATTATGTCCATCAGCTGAGACTAATCACAGAGCTCATAGGTTCACCTGATGATGCTAGCCTTGGATTTTTACGAAGCGATAATGCTCGTAGATATGTAAGACTGCTTCCACAATGTCCCAGACAACAGTTTTCTGCTAGATTTCCCAACATGTCTCCCGGTGCTATTGATTTGCTGGAGAAGATGCTCGTCTTTGATCCTAACAGGCGCATTACAGTTGATGAGGCTCTGTGCCACCCATACTTGGCACCTCTCCATGACATAAATGAGGAACCCGTTTGCCCCAGACCTTTCAGTTTTGATTTCGAGCAGCCGTCATTTACTGAAGAAGATATCAAGGAACTTATCTGGAGAGAATCTGTCAAGTTCAATCCTGATCCACCACAACTCTGA 2217 0.4258 MISPKGSQMSPKLLEILNSFEATLAVRLKKLMPKNKDEILSISWMTLAMESLCKTHNNIKTLAIEIALPLSEWDEKWIDVYLDISVKLLDICIAFSSELSRLNQGHLLLQCALHNLNTPSPQQIVRACSSIDGWRHHISSRNPRIDKCGTILDNLLGSLDLPKVKNSAKGKVLMQAMYGVKVQTAFLCSVFAAVFSGSAEKLFDRNVADTYLWAQAFTSLRHVVNEEIEVRFSNRRFAVLKELEAVDAFVKKLYPIIQGEQDTVETEALLKTVEETSKAAEKLSQGLDNLAKEVDGFFRVVLSGRDTLLSSLRSGYVTVLLRGNVYGCEISWAKFGNLEPNSIPVSIGVYRVAEIPARVSESGKYLVRCFRIGPLKQSSQDMSFESLSASAEHKGLPTHGGRYIQYNVYGNLFEVSRKYVPPLRPVGRGAYGLVCAAVNVETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENIMALKDIIRPPQKENFNDVYIVSELMDTDLHQIIRSNQPLTADHCRVGTSTICFGFNLFLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSGYTAAIDIWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRLLPQCPRQQFSARFPNMSPGAIDLLEKMLVFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPQL 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1273 738 SUPERFAMILY Protein kinase-like (PK-like) 423 697 IPR011009 -
Lele41g1273 738 Gene3D Phosphorylase Kinase; domain 1 718 727 - -
Lele41g1273 738 Gene3D Phosphorylase Kinase; domain 1 397 523 - -
Lele41g1273 738 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 418 691 - -
Lele41g1273 738 Pfam Protein BPS1 73 299 IPR004320 GO:0048364|GO:0048367
Lele41g1273 738 FunFam Mitogen-activated protein kinase 504 708 - -
Lele41g1273 738 Coils Coil 273 293 - -
Lele41g1273 738 Gene3D Transferase(Phosphotransferase) domain 1 535 717 - -
Lele41g1273 738 ProSiteProfiles Protein kinase domain profile. 420 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1273 738 ProSitePatterns Protein kinases ATP-binding region signature. 426 450 IPR017441 GO:0005524
Lele41g1273 738 FunFam Mitogen-activated protein kinase 405 514 - -
Lele41g1273 738 Pfam Protein kinase domain 424 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1273 Lele-ChrLele41 21465455 21471122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1273 379 733 MAP Kinase Gene Family AT4G01370 79.515 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele41g1273 Pkinase 7.4e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1273 41 21465455 21471122 Lele43g0123 43 1292446 1293447 hybridization
Lele41g1273 41 21465455 21471122 Lele44g0129 44 799424 800425 hybridization