Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1268 ATGTTAGCATACGACGCGGCTTTTCTCGATAAAGAGCTCTCTAAACACACTTCAATCTTTGGCCTCCCGCTCTGGGTCGTGGTCGGAATTATTGTCGGCGCCGTCATCGTCATCGCTCTCTTCCTTCTCTCCCTCTGCCTAACCTCTCGCCGCCACAGGCGCCGCCACAGTCCAAAGAAGATTCACCGTCCTAAAGAGGCTGGAACACCTGTTGTATCGAAGGAAATCCAGGAGATCGTCCACCTACCTGGACACAACCAGCACCTCCCTGCGCCGCCGCCGGAGATCCATGCTGACATCGGAAAATCAGAGCACCAGGTTGTAGTGTTTTCCGATCGAATTTCTAGTGGAGAGAGCAGGGGTACGGCCTTGAGTGCTTCCGAGGCGAGGTCGTCTTTTGGTGGTGGGAGTATCGGGCCAGAAGTCTCGCATCTGGGGTGGGGTAGATGGTACACTCTGAGAGAGCTTGAAGCTGCGACTAATGGGCTGTGTGAAGAAAACGTGGTTGGAGAAGGTGGCTATGGAATAGTGTACAAAGGAGTACTCGGTGATGGTACTCGAGTTGCAGTAAAAAACCTTCTAAATAACAAGGGCCAAGCTGAGAAAGAATTTAAAGTGGAGGTAGAAGCTATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGTTGCTCGGATACTGTGTTGAGGGAGCATACAGGATGCTTGTGTATGAGTATGTTGACAATGGCAATCTAGAACAATGGCTTCATGGCGATGTCGGTGCTGTAAGCCCTCTGATGTGGGATTTCCGTATGAACATCATACTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTCGAACCAAAGGTTGTTCACCGAGATGTGAAGTCTAGCAACATACTCCTAGATCGCCAATGGAACCCGAAAGTTTCAGACTTTGGGCTTGCTAAGCTCCTGTGTTCTGAGAATAGTTATGTCACAACTCGAGTCATGGGCACATTCGGTTATGTTGCGCCGGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGCGATATTTATAGCTTTGGAATACTTATCATGGAGATCATTACTGGGAGAAGTCCTGTTGATTATGGTAGACCACAAGGAGAGGTTAATTTGATAGATTGGTTAAAAACAATGGTTGGAAATCGAAAAGCCGAGCAAGTAGTTGATCCTAAGCTCCCCGAGACACCACCTTCAAAGGCTCTCAAACGCGCGCTGCTGGTTGCTCTCCGATGCGTTGATCCTGATGCAACTAAGAGGCCTAAAATGGGGCATGTCATCCACATGCTTGAGGCAGATGACCTACTATTCCCTGATCCTCAGGAACGCCGGAACAGGGGAGAATCTTCGCATTCGAATTGTGATCGTCAACAGAAGAAGGAATTGAATTTAGATAAAAGAAGTAACGGAGAAAGGGATGACTGA 1437 0.4878 MLAYDAAFLDKELSKHTSIFGLPLWVVVGIIVGAVIVIALFLLSLCLTSRRHRRRHSPKKIHRPKEAGTPVVSKEIQEIVHLPGHNQHLPAPPPEIHADIGKSEHQVVVFSDRISSGESRGTALSASEARSSFGGGSIGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYKGVLGDGTRVAVKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGAVSPLMWDFRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLCSENSYVTTRVMGTFGYVAPEYACTGMLTEKSDIYSFGILIMEIITGRSPVDYGRPQGEVNLIDWLKTMVGNRKAEQVVDPKLPETPPSKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFPDPQERRNRGESSHSNCDRQQKKELNLDKRSNGERDD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1268 478 FunFam Probable serine/threonine-protein kinase At1g01540 143 238 - -
Lele41g1268 478 ProSitePatterns Protein kinases ATP-binding region signature. 169 191 IPR017441 GO:0005524
Lele41g1268 478 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Lele41g1268 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Lele41g1268 478 Pfam Protein kinase domain 166 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1268 478 MobiDBLite consensus disorder prediction 441 478 - -
Lele41g1268 478 SMART serkin_6 163 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1268 478 Gene3D Transferase(Phosphotransferase) domain 1 239 441 - -
Lele41g1268 478 Gene3D Phosphorylase Kinase; domain 1 146 238 - -
Lele41g1268 478 CDD STKc_IRAK 169 435 - -
Lele41g1268 478 PANTHER OS01G0323000 PROTEIN 7 463 - -
Lele41g1268 478 FunFam Putative receptor-like serine/threonine-protein kinase 239 451 - -
Lele41g1268 478 ProSiteProfiles Protein kinase domain profile. 163 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1268 Lele-ChrLele41 21452351 21455219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1268 135 454 Receptor kinase-like Gene Family AT4G02010 44.578 1.32e-93 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele41g1268 Pkinase 3.9e-46 CL0016