Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1256 ATGGGCGATTGTGATGATGGAGGGGACTTTACTGGAACCATTTGCTCAATCTGCTACGAAGTTCTCAAGCCCATTGTCGAAGATCTCCAATCCATCAATATCTGCGGCCATGTCTTCCACGAGCTCTGTTTGCAGCAATGGTTCGAGTACTGTTCAACGGCAAAGAAATGCACTTGCCCTGTGTGCAAGCAGAGTTGTAAAGCGAGCGATGTTGCTCGGTTGTATTTCCAGTCTCTCGGAGACGTGAAGGATGCTGTTCTTCCTGAGAAATCCGTTGGGTCAGAGGAGGAAGATTCAGGGGTTTTGCGTAGAGAAGTGAAAGTGTTGGAATTGAAAGTTTCGGGGCTTAGTTCAAAATTGGAGCAACAGGAGCAGAAATTGGGAGATGTTACTAATGAGCTTTGTGCTTGCAAAGAACAGGCAAAATTAGATGCAGAACTAAAAGACCAAGCGTTGAAACAAAGAGCATTCATTCAAAACCAGCTTCTTATGAAATCAGAGGATCTTGAAAAGTCAACTTTGGAGTGTTCAAGATTGCAAGATAGAAATATGGCTCTGGCTAAAGAACTCGCAGCATTCAAATTAGTATTAGATCCGAACCTTGATGAAGATGAGGTTTTGAAGCTTGCCACTTTGGGTAATGGTGCCAACAGTAAAGATACGATTGACACATTACGAAGATCTCTGGTCATGCGGAACAGGAGTTACAAAGAATTAATGACCAAGTGCAATATTCTGGGAAGAGGGGAGGCACGTTATAGTAGAAAGCTTGAGAAGGCTAAAGAGAAAACCAAGAAACTGAAGGAAAGGATACAAGAACTGGAAACAGCAGCTGAAGTAAAAGAGAATGAAATCCTAAGGTCTCTGAAAGTTTCAAAGAAAACAGGTTGCTTAAAGAATCTTGAAAGCAGTAGCAGTTATAATTCTGATCTATTGTCAGCAGATAAAATTCCATCAAAAGAACATGGGAAGCAAATTTTGACACCACATTCCAGAACAAATCTCTCTGTGAACATCAATAATAAAGTGTCGCAATATGCAAATATGGAGAACATCAATGGTAAGGAAAGTAGACAAAATAAAGATGTGAATTTCAGCAAAGAAAGTTCAACCAGGATGTCTCTTAATGGAGCGGAAAATTACATCTCTCTTGATGAAGACGATTCAGAATTTCCTAAAGCTTGGCCAGGATGTACAAAATACAACTGTAAAGACCAAGACAGTGATACTGTTGCTCTTAGGAAGCCCACTCTAGCAAAGCGAGAGGCAGCTTCTAGTGTAGAGAGAGAAACAGCAATGAAAGAATACATCCTGGCTGAGCCTATACGAGTAGACGTTAACAATGAGTTAGGTAAGAATGCTGCTGGTACTATGCCTGAAGATGTGACATTACTAGACGATGTGAAACAAGTTCAGACCATTATTAATATTCGAAAAGAAAATCTATCTCCACCACCACTTTCCAGTCCAGGTGATGTTTGTTTTTCTGGCGGCTTACTTGGTCCTGATGGAACTAATCGATACTTGGGTAGATGGTGCAAGCGTGGAGAGAAAAAGGAATCAGTCACTCCAAAAGCTTCAATCAATGGTGATTTGATAGCTGTAGGGGCTGATGGTAGAGGTGGAAAAGTTAAAGTTCTGAGATCAAACCATACCTTCCAGGATTGTAAGGAGAATTCAGTAGGCTCAAAAAGGATGAAATTCGGACCTAAAGCAAACAACATGCAGTCTCAGGGGTGTCTGCAGATAGAACACTTCTTTGGGAGGGTTCTATTCTGCAAAAAGATGGAAGCATGTAATTTAAAGGGATAG 1812 0.4106 MGDCDDGGDFTGTICSICYEVLKPIVEDLQSINICGHVFHELCLQQWFEYCSTAKKCTCPVCKQSCKASDVARLYFQSLGDVKDAVLPEKSVGSEEEDSGVLRREVKVLELKVSGLSSKLEQQEQKLGDVTNELCACKEQAKLDAELKDQALKQRAFIQNQLLMKSEDLEKSTLECSRLQDRNMALAKELAAFKLVLDPNLDEDEVLKLATLGNGANSKDTIDTLRRSLVMRNRSYKELMTKCNILGRGEARYSRKLEKAKEKTKKLKERIQELETAAEVKENEILRSLKVSKKTGCLKNLESSSSYNSDLLSADKIPSKEHGKQILTPHSRTNLSVNINNKVSQYANMENINGKESRQNKDVNFSKESSTRMSLNGAENYISLDEDDSEFPKAWPGCTKYNCKDQDSDTVALRKPTLAKREAASSVERETAMKEYILAEPIRVDVNNELGKNAAGTMPEDVTLLDDVKQVQTIINIRKENLSPPPLSSPGDVCFSGGLLGPDGTNRYLGRWCKRGEKKESVTPKASINGDLIAVGADGRGGKVKVLRSNHTFQDCKENSVGSKRMKFGPKANNMQSQGCLQIEHFFGRVLFCKKMEACNLKG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1256 603 Coils Coil 169 189 - -
Lele41g1256 603 Coils Coil 250 284 - -
Lele41g1256 603 Pfam Ring finger domain 14 63 IPR001841 -
Lele41g1256 603 SUPERFAMILY RING/U-box 13 67 - -
Lele41g1256 603 CDD RING-H2 15 63 - -
Lele41g1256 603 SMART ring_2 15 62 IPR001841 -
Lele41g1256 603 ProSiteProfiles Zinc finger RING-type profile. 15 63 IPR001841 -
Lele41g1256 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 108 IPR013083 -
Lele41g1256 603 PANTHER RING ZINC FINGER PROTEIN-RELATED 7 590 - -
Lele41g1256 603 Coils Coil 106 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1256 Lele-ChrLele41 21357084 21361447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1256 461 590 C3H Transcription Factor Family AT4G01270 42.647 1.11e-21 97.1