Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1253 ATGGAGGACGATTGGGATCTGCACGCCGTCGTCAGAGGCTGCGCCACCGTCTCCTCCTCCTCCTCCTCTTCCTCCTCCGCCACCGCCACTTCCTCAGCATCTTCCTCTGTTTTTGGGCTTCCTCTGTTTGTTGGGACTGAAAAAGTTAGCCAAGTTTTGCCCCTCTCAGATTTCGACCCTCTTGAAGCCAGACCTTCGTCTTCGTCCATTGAAGAATTGCACGAACTCTGGAAGCCTTTCTTCCCCAAATCATCCAAGCCCCCTTCTTCATCGTCTTCACTGGTTTCTCCTCTGTCTCCTTCTTCTTCCTCCTTCTCCTACAATTCTCCCTCTGCCCCCACCAAACCTGTTCAGACACAGCACAAACAACGGACTCTGCAGCCTAAGAACAAGTTGTCTCATGCTGGTTCTGTCTCCACCATACCAAGATCTAAAAGGAGGAAGAATCAGCTGAAGAAAGTTTGTCAGGTTCCTGCTGAGTCTCTCTCCTCTGATATCTGGGCATGGCGGAAATATGGCCAGAAACCCATCAAAGGGTCTCCGTATCCAAGGGGATATTACAGGTGTAGCAGCTCGAAAGGATGCTTAGCTCGGAAACAAGTGGAGAGGAACAGATCGGACCCGTCGATGTTCATAGTCACCTACACGGCGGAGCACAACCATCCTGCTCCTACTCATCGGAACTCTCTGGCCGGCTCCACCCGTCAGAAGCCCTCGACTACCTCTGCCTCAGCCAGCGGCGGCGGTGAAACAGACAAAGCCCCGTCGAAAGCTGGTTCTCCGGCGACCTCTGGTGTGGAAGAAGAAGAGACAGTACCTCAAAGCACAGACTTCGAAAGCAAGGTGGAAATGGAAGATTTGATGGAGGAAGAGGAAGATGATGAGATCGGGTTATCAGATTCGGTCTTAACAGATGATTTCTTTGAAGGGTTAGATGAACTTACAGGGCCGTTGCCTCCGTCGGCAGCGGTGGCGCCCGTTACCGGAGACTGCGTCGCAGAACCCTTCTCTACTGGTTTCGCTCTCCCGGCATGGCCGACCACAAATGCCGCGGCCACCACCGCCGGTGGCAACTGTTAA 1080 0.5333 MEDDWDLHAVVRGCATVSSSSSSSSSATATSSASSSVFGLPLFVGTEKVSQVLPLSDFDPLEARPSSSSIEELHELWKPFFPKSSKPPSSSSSLVSPLSPSSSSFSYNSPSAPTKPVQTQHKQRTLQPKNKLSHAGSVSTIPRSKRRKNQLKKVCQVPAESLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPSMFIVTYTAEHNHPAPTHRNSLAGSTRQKPSTTSASASGGGETDKAPSKAGSPATSGVEEEETVPQSTDFESKVEMEDLMEEEEDDEIGLSDSVLTDDFFEGLDELTGPLPPSAAVAPVTGDCVAEPFSTGFALPAWPTTNAAATTAGGNC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1253 359 SUPERFAMILY WRKY DNA-binding domain 161 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g1253 359 MobiDBLite consensus disorder prediction 16 35 - -
Lele41g1253 359 MobiDBLite consensus disorder prediction 83 153 - -
Lele41g1253 359 Gene3D WRKY domain 147 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele41g1253 359 ProSiteProfiles WRKY domain profile. 158 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g1253 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 315 IPR044810 GO:0003700
Lele41g1253 359 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g1253 359 Pfam WRKY DNA -binding domain 165 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele41g1253 359 MobiDBLite consensus disorder prediction 221 249 - -
Lele41g1253 359 MobiDBLite consensus disorder prediction 212 280 - -
Lele41g1253 359 MobiDBLite consensus disorder prediction 84 144 - -
Lele41g1253 359 FunFam WRKY transcription factor 22 147 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1253 Lele-ChrLele41 21342848 21344185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1253 1 357 WRKY Transcription Factor Family AT4G01250 46.281 5.87e-88 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele41g1253 WRKY 2.5e-25 CL0274