Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1216 ATGGAACAATTTTGGCAGCTGGGAGAGGCACTAGGAAGCTTGAAGGCTTTAATGGTGTTCAAAGACAACATCCAAATCAACCAGAGACAGTGTTGTCTATTGCTGGATGTCTTCACCTTTACATACGATTCAATTGCAGAGGAGATCAGACAGAATCTTAAATTTGAGGAGAAACATGACAAGTGGAAGTTTCTTCAACAGCCATTGAAGGAGATCCATAGGATATTCAAAGAAGGAGAAGCTTACGTTAAGCGGTGCTTGAAAATCAAAGATTGGTGGGCCATAGCCATTATTTCGTACCAGAGCAAAGATTGTGTTGAGCTTTACATCCATAACTTGCTTTCCTGCATTCCCATTATTGTTGAAGCGATTGAATCCGCAGAGGAAACATCAGGATGGAATCAGGATAAAATGCAGTGGAGAAAAATCATCAATTCAAACAAGTACAGGAAAGAATACGTAGACATGAATCTTTTCCAATGGAAATTTGGGAAGCGGTATCTTGTTTCTCGGGATTTCTGCAACCGCTACGACACAGTTTGGATGGAAGATAGGTGGTTTATCATCAACAAAATCCAAGAGAAGATGATGTCAGGTTTGACAAAGCAAGGGAAGAAATTAGCAGACCTGCTCTTGAAGAACTTAAAAGGATCTGAATCAATGGAGGGTAAGCTGCTTCCCAGCTCAATCTTGCTGGAGTCAAAGGACTACCAGGTAAGGCGAAGACTCAGGAATAGCGGGCGGTACAAGGAGATTACATGGTTAGGCGAAAGCTTTGTCGTAAGGCAGCTTTCTGGGGATGTTCAAGCTTTAGAGCCAGAGATCACATCACTCTTGTCACTTTCCCACACAAATATAATGGAATTCCTTTGTGGGTTTGTTGACAATGGGAAGAAAGAGTGCCTCTTGTTAATGGAACTGATGAGCAGAAACCTCAGCACCTACATCAAAGAGGTATACAGCCCAAGGAAACGGATACAGTTCACACTTCCAGTGGCAGTTGATCTTATGCTTCAAATTGCCAGAGGAATGGAATATTTGCATTCAAAGAAGATATATCATGGAGAGCTAAATCCTTTGAAAATTATTGTTAAACCTAGAGGTTCATCCTCAGAAGGGTACATGCATGCCAAAATCTCAGGGTTTGGGCTATCTTCAGTTAAGAACTTGAACAACAAAGCAGTTTCAAACCAGAATGGGACCCTCCCACTTGTATGGTACCCTCCAGAAGTTCATGAAGAGCTAGAACAAACTGGGAGTGCTGAGAACTCCATGTACACTGAGAAATCAGATGTGTATAGTTTCGGAATGGTTTGCTTTGAGCTTCTAACTGGTAAAGTCCCTTTTGATGACAATCACCTACAAGGAGACAAAATGAGCAGATACATAAGAGGAGGAGAGAGACCACTTTTCCCATTAAGTGTGCCAAAATATGTCACTAACTTGACTAAGAAATGTTGGCATACCGACCCAAAGCAACGACCAAGCTTCTCTTCCATCTGCAGAATTCTTCGTTACATAAAACGGTTTCTTGTGATGAATCCTGATTGCAATAACCAGCTAGATTCATTAGTACCTCTGGTAGATTATTATGATGTGGAATTGGCGCTTTTGAAAAAGTTCCCTTCTTGGGGGAGCTCTGATTCATCACCAATATCACAAATTCCATTTCAAATATTTGCCTACAGAGTTATAGAGAAAGAAAAGATAAGTTCAAGCTCTAGGGAGAGCTCTGATATTGGAAGTGATACTTCAGCATGTGGTGATGAACATTTTACCTTTCGTGATGAACCGTTTCCATCAACAACAGAAAGGAAATCTTTTGCTGGACCTGACGGTAAAAGCAGGAAGCTTTCACAAACCAAGAAAATGAACTCAAGAGGCATCAAACAACCAGTTACAACAAATAGACAATCGAATAGGCCTCCACAGATGTCTCTTTGTTCCCAAAGTCTCAAGTTGAGTTCAGGGAGCCACCTAACGACAATGAGTTCAAGAATTAGAAGAGCATCTCCTTGTCATGTCTCAGATTCTGAGCTTCCTTAG 2046 0.412 MEQFWQLGEALGSLKALMVFKDNIQINQRQCCLLLDVFTFTYDSIAEEIRQNLKFEEKHDKWKFLQQPLKEIHRIFKEGEAYVKRCLKIKDWWAIAIISYQSKDCVELYIHNLLSCIPIIVEAIESAEETSGWNQDKMQWRKIINSNKYRKEYVDMNLFQWKFGKRYLVSRDFCNRYDTVWMEDRWFIINKIQEKMMSGLTKQGKKLADLLLKNLKGSESMEGKLLPSSILLESKDYQVRRRLRNSGRYKEITWLGESFVVRQLSGDVQALEPEITSLLSLSHTNIMEFLCGFVDNGKKECLLLMELMSRNLSTYIKEVYSPRKRIQFTLPVAVDLMLQIARGMEYLHSKKIYHGELNPLKIIVKPRGSSSEGYMHAKISGFGLSSVKNLNNKAVSNQNGTLPLVWYPPEVHEELEQTGSAENSMYTEKSDVYSFGMVCFELLTGKVPFDDNHLQGDKMSRYIRGGERPLFPLSVPKYVTNLTKKCWHTDPKQRPSFSSICRILRYIKRFLVMNPDCNNQLDSLVPLVDYYDVELALLKKFPSWGSSDSSPISQIPFQIFAYRVIEKEKISSSSRESSDIGSDTSACGDEHFTFRDEPFPSTTERKSFAGPDGKSRKLSQTKKMNSRGIKQPVTTNRQSNRPPQMSLCSQSLKLSSGSHLTTMSSRIRRASPCHVSDSELP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1216 681 Pfam Protein tyrosine and serine/threonine kinase 268 503 IPR001245 GO:0004672|GO:0006468
Lele41g1216 681 Gene3D Transferase(Phosphotransferase) domain 1 245 522 - -
Lele41g1216 681 ProSiteProfiles Protein kinase domain profile. 225 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1216 681 MobiDBLite consensus disorder prediction 622 671 - -
Lele41g1216 681 FunFam Kinase family protein 234 517 - -
Lele41g1216 681 MobiDBLite consensus disorder prediction 573 681 - -
Lele41g1216 681 SUPERFAMILY Protein kinase-like (PK-like) 255 516 IPR011009 -
Lele41g1216 681 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Lele41g1216 681 PANTHER SERINE-THREONINE PROTEIN KINASE 271 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1216 Lele-ChrLele41 21120722 21123278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1216 247 511 MAP Kinase Kinase Kinase AT1G14000 32.384 2.29e-23 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lele41g1216 PK_Tyr_Ser-Thr 1.2e-39 CL0016