Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1205 ATGGACAAACGCCGCAGAAAGCAAGAGAAGACTGAAAGCTCTTACTCTGAAGAGGTGAGCAGCATTGAGTGGGAGTTCATAACCATGTCAGAACAGGAAGAAGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTGATAGCAGGCAGGATTCCGGGTCGAAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAAGTCTTCGCCACCAGAAGAGAGAATGCCTCCAAATGTAAATCCTAA 264 0.4508 MDKRRRKQEKTESSYSEEVSSIEWEFITMSEQEEDLIYRMYKLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQVFATRRENASKCKS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1205 87 Gene3D - 30 87 - -
Lele41g1205 87 SUPERFAMILY Homeodomain-like 30 68 IPR009057 -
Lele41g1205 87 CDD SANT 28 67 IPR001005 -
Lele41g1205 87 FunFam MYB-like transcription factor 28 70 - -
Lele41g1205 87 SMART sant 25 73 IPR001005 -
Lele41g1205 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 73 - -
Lele41g1205 87 Pfam Myb-like DNA-binding domain 30 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1205 Lele-ChrLele41 21014869 21016415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1205 28 83 MYB Transcription Factor Family AT5G52600 51.786 2.48e-16 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele41g1205 Myb_DNA-binding 6.6e-07 CL0123