Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1156 ATGATTGTTTACAGCTCAGTTTGGTTCATTCTTCTTCTAACAGTATTGGTTTTTCTTACGTTCTTCTTCCTTCGGGTGATTCTGTTCAAAACTGGATTCATCTATACTCTGAAGAAACTATGGAGAACCTTTGAGGATTACTTTCATGTTTACCAGTTCTTCAAAATTCCAGAACTCAACGAGAGCTTGAAGGAGAATCAGCTTTACAAGAAGGTCTCTCTTTATCTGCATTCTCTGCCTTCCCTTGAAGACTCTGATTTCACCAACTTCGTCACTTCCTCAGGGAAGAAGCAGAACGACATCGTTCTACGCCTCGACCCCAAACAAACCATTGGCGACGAATTTCTTGGAGCCAGAGTGTTCTGGTTCCTCGAAGCAGAACAAACACCTGAGTCGAAAAACAGAACGTTCGTGCTGAAAATCAGAAAAGCCGACAAGAGAAGAATTCTCCGGCCTTATCTCCAGCACATCCACACCGTTGCCGATGAAATAGAGCAACAAGGAAAACGTGATTTGAAGCTGTACATGAATGCTGGCTCCCAATCCATAGGCGGCGACGGGAATGTCCGGTGGAGATCCGTTCCGTTCATGCATCCATCAACCTTGGATACCATCGCCATGGAAACCGATCTGAAGAACAAGATAAAATCCGACCTCGAATCTTTCCTCAAAGCTAAACAGTACTACCAACGATTGGGTCGGGTATGGAAACGGAGCTTCCTTTTGTATGGACCATCCGGCACTGGAAAATCGAGCTTTGTCGCTGCCTTGGCCAATTTCCTCAATTACGATGTATACGACATCGACCTTTCAAACGTCCCTGGAGATTCCGATTTGAAGCTGCTGCTGCTGGAAACGACGCCGAAATCGATCATCGTAATCGAAGACCTTGATCGGTTCCTGATGGAGAAGAAATCGACGGGTGTGAGTTTGTCGGGAGTATTGAACTTCATGGACGGGATTCTGAACTCGTGCTGCGCAGAGGAGAGAGTCATGGTTTTCACGATGACCAGTAAGGATCAAATCGACCCGAACCTACTCCGACCGAGTCGCGTCGACGTCCATATCCATTTCCCGCTCTGTGATTTTGCATCATTCAAGACGCTCGCCAGTAGCTATCTCGGTGTGAAGGACCACAAGCTCTTCCCACAGGTTCAAGAGATTTTTGAAAACGGTGCGAGTTTGAGCCCCGCCGAGATAGGCGAGTTAATGATCGCGAATCGGACCTCACCCAGTCGGGCCATTAAGTCGGTGATCAGCGCGCTGCAAACGGACGGCGATGGAAGGGGAGGCGGGAAGATCGGGCGGCGATCGGGGGAGAGCAACGACGCCAAGGAATTGGAACAACGGGGTTCTCAGTCTCCGTATAGCGAGGGTCTCTCGACGGTGAAGGATTTACGGAAGCTGTACGGTTTGTTCAGAGTAAAGAGCAACGCGAAATCTCAGTCGTTCGATGGTGGGGTGAGTCCCAGGTCAGAGCGATGA 1485 0.4889 MIVYSSVWFILLLTVLVFLTFFFLRVILFKTGFIYTLKKLWRTFEDYFHVYQFFKIPELNESLKENQLYKKVSLYLHSLPSLEDSDFTNFVTSSGKKQNDIVLRLDPKQTIGDEFLGARVFWFLEAEQTPESKNRTFVLKIRKADKRRILRPYLQHIHTVADEIEQQGKRDLKLYMNAGSQSIGGDGNVRWRSVPFMHPSTLDTIAMETDLKNKIKSDLESFLKAKQYYQRLGRVWKRSFLLYGPSGTGKSSFVAALANFLNYDVYDIDLSNVPGDSDLKLLLLETTPKSIIVIEDLDRFLMEKKSTGVSLSGVLNFMDGILNSCCAEERVMVFTMTSKDQIDPNLLRPSRVDVHIHFPLCDFASFKTLASSYLGVKDHKLFPQVQEIFENGASLSPAEIGELMIANRTSPSRAIKSVISALQTDGDGRGGGKIGRRSGESNDAKELEQRGSQSPYSEGLSTVKDLRKLYGLFRVKSNAKSQSFDGGVSPRSER 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1156 494 Gene3D - 191 373 IPR027417 -
Lele41g1156 494 SMART AAA_5 236 362 IPR003593 -
Lele41g1156 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 421 IPR027417 -
Lele41g1156 494 MobiDBLite consensus disorder prediction 423 459 - -
Lele41g1156 494 Pfam Domain associated at C-terminal with AAA 37 124 IPR025753 -
Lele41g1156 494 MobiDBLite consensus disorder prediction 430 447 - -
Lele41g1156 494 CDD AAA 237 360 - -
Lele41g1156 494 Pfam ATPase family associated with various cellular activities (AAA) 241 360 IPR003959 GO:0005524|GO:0016887
Lele41g1156 494 PANTHER BCS1 AAA-TYPE ATPASE 46 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1156 Lele-ChrLele41 20617364 20618848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1156 232 358 Calmodulin-binding Proteins AT3G56690 30.282 6.85e-08 53.5