Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1144 ATGGGCCAGTGCTACGGCAAGACCAATCCCGCCGCTGAAAATGACGGTGCCGCAAATACAACCACTATTATCGCCGATTCCGGTGGCCAGCCGCAGTCGCCGCTGCCGTCAGTGAGCGGTGGCAACGGGTTTCCGTCGGTGAAGAACACACCTGCCCGGTCGTCCAACGCGAGCCCATGGCCAAGCCCGTACCCGCAAGGTGTCAACGCGAGCCCGTTTCCCGGTGGGGTGTCACCCTCGCCGGCGAGGACCTCTACGCCCAGGAGGTTTTTTCGACGACCGTTCCCTCCTCCGTCTCCAGCGAAGCATATAAGAGCGTCGCTGGCAAAGCGGCTTGGTCATGGGAAACCCAAGGAGGGCCCGATCCCCGAGGACCGCGGCACGGAACCGGAGCAGGCGCTGGACAAGAGCTTTGGGTATAGTAAGAATTTTGGAGCTAAGTATGAGCTAGGAAAGGAAGTGGGAAGGGGCCATTTTGGTCATACGTGCTCTGCATGGGGCAAGAAGGGAGAGCTCAAAGACCATCCTGTAGCAGTGAAAATCATCTCGAAGGCGAAGATGACAACAGCAATAGCAATCGAAGATGTTCGGAGAGAGGTGAAGATGTTAAAAGCTCTATCTGGCCATAAGCATCTTGTCAAGTATCATGATGCTTGTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGGGGGGAACTTCTTGACAGAATTTTGTCAAGGGGAGGGAGATATACTGAGGAGGATGCAAAAGTTATAGTTTTGCAGATTTTAAGTGTTGTCGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGATCTAAAACCTGAGAATTTTCTGTTCACTTCACGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTCTCTGACTTCATTAGACCAGATGAAAGATTGAATGACATCGTTGGAAGTGCCTACTATGTTGCGCCTGAGGTCCTTCACAGATCCTATAGTCTGGAAGCAGATATATGGAGTATAGGTGTTATCACCTATATCTTGTTATGTGGAAGTCGACCTTTCTGGGCTCGAACAGAATCTGGAATATTTCGTGCAGTGCTTAGAGCTGATCCAAATTTTGATGATTTGCCTTGGCCTACTGTATCTGCAGAGGCCAAGGACTTTGTAAAAAGGCTGTTGAACAAGGACTACAGGAAAAGAATGACTGCTGTCCAAGCTCTAACTCACCCTTGGTTGAGGGATGACAACCGTCCTATACCTTTAGATATATTAGTTTACAAATTAGTGAAGTCTTATCTCCATGCAACACCATTCAAACGAGCAGCACTAAAGGCCCTTGCAAAAGCCTTGTCAGAAGATCAATTGGTGTATCTCAGAGCACAATTCAGATTGTTAGAACCAAACAAAGACGGCTATGTCTCCCTTGACAACTTCAAAATGGCTCTTGTACGTAATTCAACAGATGCCGTGAAGGAGTCAAGGGTTCTAGATATTATACATTCGATGGAACTGCTTACCTATAGGAAGATGGACTTTGGAGAATTTTGTGCAGCCGCAATCAGCACATACCAATTAGAGGCACTTGACACGTGGGAGCACATTGCCTCCACTGCTTTTGAGCATTTCGAGAGGGAGGGCAACCGTGTGATAACAGTTGAAGAATTAGCAAGAGAGTTGAATCTTGGTCCTTCGGCTTATTCGATTATCAGAGATTGGATACGAAATACTGATGGAAAGCTTAGTTTACTTGGATACACAAAATTTTTGCATGGTGTCACACTGCGTAGTTCAAATACAAGACACCATTAG 1803 0.4709 MGQCYGKTNPAAENDGAANTTTIIADSGGQPQSPLPSVSGGNGFPSVKNTPARSSNASPWPSPYPQGVNASPFPGGVSPSPARTSTPRRFFRRPFPPPSPAKHIRASLAKRLGHGKPKEGPIPEDRGTEPEQALDKSFGYSKNFGAKYELGKEVGRGHFGHTCSAWGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHKHLVKYHDACEDANNVYIVMELCEGGELLDRILSRGGRYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTVSAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDNRPIPLDILVYKLVKSYLHATPFKRAALKALAKALSEDQLVYLRAQFRLLEPNKDGYVSLDNFKMALVRNSTDAVKESRVLDIIHSMELLTYRKMDFGEFCAAAISTYQLEALDTWEHIASTAFEHFEREGNRVITVEELARELNLGPSAYSIIRDWIRNTDGKLSLLGYTKFLHGVTLRSSNTRHH 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1144 600 MobiDBLite consensus disorder prediction 112 132 - -
Lele41g1144 600 MobiDBLite consensus disorder prediction 1 136 - -
Lele41g1144 600 FunFam CDPK-related kinase 1 141 236 - -
Lele41g1144 600 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Lele41g1144 600 Gene3D - 428 518 - -
Lele41g1144 600 ProSiteProfiles Protein kinase domain profile. 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1144 600 FunFam Calcium-dependent protein kinase SK5 320 415 - -
Lele41g1144 600 ProSitePatterns Protein kinases ATP-binding region signature. 154 180 IPR017441 GO:0005524
Lele41g1144 600 Gene3D Transferase(Phosphotransferase) domain 1 237 421 - -
Lele41g1144 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Lele41g1144 600 MobiDBLite consensus disorder prediction 13 64 - -
Lele41g1144 600 SUPERFAMILY EF-hand 436 589 IPR011992 -
Lele41g1144 600 ProSiteProfiles EF-hand calcium-binding domain profile. 451 486 IPR002048 GO:0005509
Lele41g1144 600 SMART serkin_6 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1144 600 Gene3D - 434 580 - -
Lele41g1144 600 FunFam CDPK-related kinase 1 446 518 - -
Lele41g1144 600 FunFam CDPK-related kinase 3 140 312 - -
Lele41g1144 600 PANTHER SERINE/THREONINE-PROTEIN KINASE 132 575 - -
Lele41g1144 600 Pfam Protein kinase domain 148 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1144 600 SUPERFAMILY Protein kinase-like (PK-like) 143 431 IPR011009 -
Lele41g1144 600 CDD STKc_CAMK 147 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1144 Lele-ChrLele41 20514859 20521860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1144 1 594 EF-hand Containing Proteins AT3G50530 59.019 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele41g1144 Pkinase 6e-68 CL0016