Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1128 ATGAGCATCTCCGTGAATGGACAATCCCAGGTGCCTCCTGGTTTTCGCTTCCATCCAACCGAAGAGGAGCTTTTGCAGTACTACCTCAGAAAGAAGGTTTGCTACGAGAAGATCGACCTCGACGTTATTCGCGATGTCGATCTCAACAAGCTCGAGCCCTGGGATATACAAGAGAAGTGCAAAATAGGAACCACCCCACAGAACGATTGGTACTTCTTCAGCCATAAAGACAAGAAGTATCCCACCGGAACTCGTACCAACAGGGCCACGGCTGCCGGATTCTGGAAGGCGACAGGGCGGGACAAGGTGATATACGGCAACGGAAAGAGGATTGGGATGAGAAAGACCCTGGTTTTCTACAAAGGACGTGCCCCTCATGGCCAAAAGTCTGATTGGATCATGCATGAGTATAGGCTTGAAGATAACATCACCAACACCGAGACCAGCATTGTGACGAATGTAATAGGAGATGGAGCACAGGAAGAAGGGTGGGTGATTTGCAGGATATTCAAGAAGAAGAACCATCTCAAAACCCTAGAGAGCCCCTTGGCTTCGTCCATTGCAGAGGAAACACTCAGAAGCCACGACCACGACTCCATGTTTGATCCTTGTGATGACGATGAGGGAGCTCTGGAGCAAATTCTTGAGCAAATGGGAAGAAGCTATTGCAAAGAAGAAGAAGAACAGAACGACCCCACCAACACCACCACCAACAACAACCGAAGAATCACCAGACCGTTTGACGACACTATCATGAACAACAACAACAACATTCTTAACAATGGTTACTTCCACCATGACAGGTTCTTGAAGCTTCCTCCCTTAGAAAGCCCAAAATCTAATAATTACGGGTACCGCCCTATTATTGAAGGAGCATATGGCGGCGGCGACCACAGCTATGTTCATCATCAGATGGAATCAACAACTTCATCTGTTAATGGTGGTCTTATCACCAACTGGGCTGCACTGGATCGTCTAGTAGCTTCGCAGCTGAATGGCCAAACGGAGACTTGTCGGAGCCTACCTTGCTTCAATAATAATACCACCAGAGAGCCCATCACCACAATGGGCTATGACTTGAGCGAGCATGATCGGCAACTTCTTCCGACCCTACGATCTCCGTCACTTTCATCAATAACATCATCATCAGCCGCCCACAACAACAGTGGAGCTAATTACGATTACACCAACGAGATTGACCTCTGGAACTTTGCCCGATCCGCATCATCGTTAGTGTCAGGCTCCGAACCACTATGCCACGTGTCCAACACATCATCGGTGTAG 1284 0.4836 MSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYGNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDNITNTETSIVTNVIGDGAQEEGWVICRIFKKKNHLKTLESPLASSIAEETLRSHDHDSMFDPCDDDEGALEQILEQMGRSYCKEEEEQNDPTNTTTNNNRRITRPFDDTIMNNNNNILNNGYFHHDRFLKLPPLESPKSNNYGYRPIIEGAYGGGDHSYVHHQMESTTSSVNGGLITNWAALDRLVASQLNGQTETCRSLPCFNNNTTREPITTMGYDLSEHDRQLLPTLRSPSLSSITSSSAAHNNSGANYDYTNEIDLWNFARSASSLVSGSEPLCHVSNTSSV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1128 427 MobiDBLite consensus disorder prediction 224 247 - -
Lele41g1128 427 SUPERFAMILY NAC domain 7 172 IPR036093 GO:0003677|GO:0006355
Lele41g1128 427 FunFam NAC domain-containing protein 20 176 - -
Lele41g1128 427 Gene3D NAC domain 20 177 IPR036093 GO:0003677|GO:0006355
Lele41g1128 427 MobiDBLite consensus disorder prediction 232 247 - -
Lele41g1128 427 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 248 - -
Lele41g1128 427 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Lele41g1128 427 ProSiteProfiles NAC domain profile. 11 172 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1128 Lele-ChrLele41 20374717 20376210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1128 1 425 NAC Transcription Factor Family AT2G46770 53.721 8.30e-137 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele41g1128 NAM 7.3e-36 No_clan