Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1124 ATGAAATCTCGCACTGCAGCCGGCTGCGACGAAATCCTCTCTTCATCGAGTGTAAAAATGTCGACTGGGGAGGTTGCCTGCACTTACGCGAGTTTGATTCTCTTCGATGATAACATCCCAATCACCGCTGAGAAGATCTCAACCTTGGTGAAAGCCGCAAATGTTGATGTTGAATCTTATTGGCCAAGCTTATTTGCTAAGCTTTCTGAGAAGCGGGACCTTGGGGATCTGATCTTGAATGCTGGAGGTGGTGGGGCTCCAGTTGCTGTTGCCGCTGCTCCAGCTGCCGCTGGCGGAGCTGCACCCGCAGCTGCTCCTGCTGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGTGACGATGACATGGGCTTCAGCTTGTTTGATTAG 393 0.5165 MKSRTAAGCDEILSSSSVKMSTGEVACTYASLILFDDNIPITAEKISTLVKAANVDVESYWPSLFAKLSEKRDLGDLILNAGGGGAPVAVAAAPAAAGGAAPAAAPAAEEKKKEEPQEESDDDMGFSLFD 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1124 130 FunFam 60S acidic ribosomal protein P1 20 82 - -
Lele41g1124 130 CDD Ribosomal_P1 24 80 - -
Lele41g1124 130 Gene3D - 20 82 IPR038716 -
Lele41g1124 130 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 20 130 - -
Lele41g1124 130 Pfam 60s Acidic ribosomal protein 41 129 - -
Lele41g1124 130 MobiDBLite consensus disorder prediction 101 130 - -
Lele41g1124 130 Hamap 50S ribosomal protein L12 [rpl12]. 25 130 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1124 Lele-ChrLele41 20329465 20331285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1124 20 130 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.757 4.00e-39 125