Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1119 ATGGGTGAAGCGGTTCTGGCTAGCGGTAAAAAGGGGATGGAGGTGAGGTTGGAGGTAGAAGAAGACATGAACATGATGAACCAGCTGAAGGATGAGAGCTCCACAGAAATGGATAAGTTGGACAAGCTTCTTCCTCAGATGATGCTCAGAGTTCTGCTGGTGGAAGCTGATGATTCTACTCGCCAGATTATCGCAGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAATATTGAAGAAGAAGGCTCCTGATATTGATCTCATATTAACTGAAGTGGAGCTGCCTTCAATATCTGGATTTGCGCTTCTTACTTTAATCAAGGAGCATGAAATTTGTAGAAACATTCCCGTCATAATGATGTCTTCTCATGATTCTATTTGCATGGCAATGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGTACTATCAACCTTGTGGCAACATGTGTGGAGAAGGAATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGCTGCCAGCAATCATTCAACTGGTTCTGTGGCCTCCACACAGAAAAATAATGAATGCTGCGAGATAAGGAGTGTAGCCCAAAGCACTTGTACATCGCCTATTTTGGAAGCTGAGAGTGCATACGTGCAAAATATGCAGGATACGTCCCAGCCCAGGAGTTCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAGTCTGCAAAACTTGAAGGGGACTCCGCCAAACATAATAATGGAACTACTAGTGTGTTGGAGCAAGGCAGTTGTGCTGAAACAGAAAATCAGGATGAATCTTTAAGAGCAGAGTTAAGTAGAGACAATGCTAATGTTGGTACAGAGATTGATGGCTGCAAGGATGAATTGGTAGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATATTCCAAGTAACGCTGATGAGAATTATAGTCTTGCTGATGATGGGAGAGACAAGTTTGATTTTGATCAGCAGTTGGAACTTTCCTTGAGAATTTTTTCTGGTAGCTCATGTAAACAAGAACCTGAGGAAAGGCAAACACTGAACGATTCAAATGTGTCTGCCTTTTCTTGGTATAGTGGCAATAAGTTGCCGCAGCCCCTTTTTCCATCACTACCGATGAGTTCTGCCAAAACATATAGCACTGAGCTGAATTCCCAGAATTCTAATGAAATATCTGGAATTGATACTTCTTATCAGTTTGGTGGAACAAATCATACTCAGGAGAATACAACCCCACTGGTTCTTCACCAGTCTGGACAAGCTGGTGTACAAATGCCAAACGTTCATCCTGGATCCTCTCCTGCTACTGGTGTTACTTCTGATCATATGTTTAGTGGAAATGTGAAGGTTGTGCCTTCTATATTCTACACACAATCCAGTGCTCATACCATGTGGAGTCCCAAATCAGTCGACCGGAGAGAGAATTCTCACTTTCCCCCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAACTCAGAACAACATTATCAATGGTCTGATGCCAGTTGTGCTCCTCTTGATAAAAAGACACGGCGTGATAAAAGCTACTTGGATTCTGCAATGCATGATTATCCAGGTGCTTATCAGAATACCAGTATTAGTTTATGCCATGACACTCCGAACCACATTAATGATGGTTCATATGGAAGTATAGGCCGTATAAGAGATGTAGATCATACTTCGTCTGTGGTAATTGAGAAAACCCCTGAAAGCTTTAGCAGCAACAGTTATCAAGATTATGATAAATACAGAGGGGCGGATTCTCTGCGTCCGAGCCAAAGGGAAGCTGCTCTAACAAAGTTTAGACTGAAGAGGAAAGACAGATGCTATGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCACCTGATGATTCTGGTGGTGGTTCCTGA 2019 0.424 MGEAVLASGKKGMEVRLEVEEDMNMMNQLKDESSTEMDKLDKLLPQMMLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWEILKKKAPDIDLILTEVELPSISGFALLTLIKEHEICRNIPVIMMSSHDSICMAMKCILKGAADFLIKPVRRNVLSTLWQHVWRRNPKKLEATSENNAASNHSTGSVASTQKNNECCEIRSVAQSTCTSPILEAESAYVQNMQDTSQPRSSSNLSNIDTVKYEESAKLEGDSAKHNNGTTSVLEQGSCAETENQDESLRAELSRDNANVGTEIDGCKDELVEPSRGAIDLIATFENIPSNADENYSLADDGRDKFDFDQQLELSLRIFSGSSCKQEPEERQTLNDSNVSAFSWYSGNKLPQPLFPSLPMSSAKTYSTELNSQNSNEISGIDTSYQFGGTNHTQENTTPLVLHQSGQAGVQMPNVHPGSSPATGVTSDHMFSGNVKVVPSIFYTQSSAHTMWSPKSVDRRENSHFPPTTSFLSNAESHNSEQHYQWSDASCAPLDKKTRRDKSYLDSAMHDYPGAYQNTSISLCHDTPNHINDGSYGSIGRIRDVDHTSSVVIEKTPESFSSNSYQDYDKYRGADSLRPSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPPDDSGGGS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1119 672 MobiDBLite consensus disorder prediction 487 511 - -
Lele41g1119 672 Gene3D - 47 292 - -
Lele41g1119 672 MobiDBLite consensus disorder prediction 642 672 - -
Lele41g1119 672 Pfam Response regulator receiver domain 51 161 IPR001789 GO:0000160
Lele41g1119 672 MobiDBLite consensus disorder prediction 252 273 - -
Lele41g1119 672 MobiDBLite consensus disorder prediction 177 194 - -
Lele41g1119 672 SUPERFAMILY CheY-like 48 176 IPR011006 -
Lele41g1119 672 SMART REC_2 49 164 IPR001789 GO:0000160
Lele41g1119 672 ProSiteProfiles CCT domain profile. 616 658 IPR010402 GO:0005515
Lele41g1119 672 MobiDBLite consensus disorder prediction 175 194 - -
Lele41g1119 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 49 281 IPR045279 GO:0009736
Lele41g1119 672 MobiDBLite consensus disorder prediction 497 511 - -
Lele41g1119 672 ProSiteProfiles Response regulatory domain profile. 50 168 IPR001789 GO:0000160
Lele41g1119 672 Pfam CCT motif 616 658 IPR010402 GO:0005515
Lele41g1119 672 CDD psREC_PRR 51 154 - -
Lele41g1119 672 MobiDBLite consensus disorder prediction 257 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1119 Lele-ChrLele41 20295725 20299844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1119 615 665 Response Regulator Gene Family AT5G24470 86.275 2.56e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele41g1119 Response_reg 1e-21 CL0304