Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1117 ATGTACAAGCACGTACGATCTCTTCATCTTCTCTTTTCTGTTGAATTATCTTCCTTTTTAGAAGTTTCTGAACCAACTATTGATCCCAAGCTTGAAGCCCAGTGGCCGGCGGTTGCAATATGTGAGATTCATTATTCTGTCCATATCTTGTCGAAGTCTCAGGAACTACAGAAAAGAGTTTGGATGTTTTTCATTCTTGAAAATAACATTTTAAGTAGCATTGTATTCCAGATGGAAGCACTGAACTCCCGGGATGCACAAGTTATTGATGTTCGTGGACACGCCTCTGATGGTGGAAGGGCTCTTGGAGGAAGCAAGGTTTGTGGGGAAGCACCATGTGGGTTCTCAGACGCTGGATCCATCAACAGGGATTCCAAAGAACGATCGACTTCGATGCGAAAACTTCTGACGGCAGTGATTCTCTGTGTTGTTTTCATGAGCATTGAAGTTGTTGGGGGAATCAAAGCTAATAGTCTTGCAATATTGACCGATGCTGCACACTTGCTTTCGGATGTTGCATCCTTTGCCATCTCATTATTCGCTTTGTGGGCTGCTGGATGGGAAGCCACCCCTCGTCAGTCATATGGATTTTACAGGATAGAGATTCTCGGAGCCTTGGTTTCTATCCAACTAATATGGTTGCTCACAGGGATTCTAGTCTTTGAAGCCATTCAAAGACTCATTTCTGGTATTAATGAGGTTAATGGCCTGTTAATGTTTTTGGTTTCTGCATTTGGTCTACTGGTTAACATTATCATGGCTCTCTTATTGGGTCATGATCATGGACACGGACACGGACATGGACATGATGGACATGATCATGGTCATGACCATGGATCTGTAGTTTCTACCCATCACCATCATCATAATGGTGAAGAACATTTGAGAGATAGGCCCCATCATCATCACCATAGTCATGACAATGTAAGCGAACCACTTCTCAATGGATCAAAAGGCGGACCTGCAGAGGAGAAGAAAGAAGTCAAAGAACGGAACATTAATGTGCAAGGGGCTTATCTCCATGTACTTGGGGACTCTATCCAAAGTGTTGGGGTAATGATCGGAGGAGCAATTGTTTGGTACAAACCCGAGTGGAAAGTAGTTGACTTGATTTGCACACTAGTGTTCTCGGTGATTGTTTTGGCGACGACGATCAATATGCTGCGAAGCATACTTGAAGTGCTGATGGAGAGCACGCCAAGAGAGATAGATGCAACAAAACTTGAACAGGGGCTGCTGGACATGGATGAAGTTGTGGCTGTTCATGAGTTGCATATATGGGCCATTACAGTTGGTAAGGTTTTACTAGCTTGTCATGTGAAAATTAAACCAGAAGCTGATGCAGATATAATGTTGGACAAGGTCGTAGATTATATCAAAAGGGTCTACAACATAAGTCACGTCACCATTCAGATAGAGCGCTAG 1425 0.4337 MYKHVRSLHLLFSVELSSFLEVSEPTIDPKLEAQWPAVAICEIHYSVHILSKSQELQKRVWMFFILENNILSSIVFQMEALNSRDAQVIDVRGHASDGGRALGGSKVCGEAPCGFSDAGSINRDSKERSTSMRKLLTAVILCVVFMSIEVVGGIKANSLAILTDAAHLLSDVASFAISLFALWAAGWEATPRQSYGFYRIEILGALVSIQLIWLLTGILVFEAIQRLISGINEVNGLLMFLVSAFGLLVNIIMALLLGHDHGHGHGHGHDGHDHGHDHGSVVSTHHHHHNGEEHLRDRPHHHHHSHDNVSEPLLNGSKGGPAEEKKEVKERNINVQGAYLHVLGDSIQSVGVMIGGAIVWYKPEWKVVDLICTLVFSVIVLATTINMLRSILEVLMESTPREIDATKLEQGLLDMDEVVAVHELHIWAITVGKVLLACHVKIKPEADADIMLDKVVDYIKRVYNISHVTIQIER 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1117 474 MobiDBLite consensus disorder prediction 264 309 - -
Lele41g1117 474 SUPERFAMILY Cation efflux protein transmembrane domain-like 129 397 IPR027469 -
Lele41g1117 474 TIGRFAM CDF: cation diffusion facilitator family transporter 132 474 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lele41g1117 474 Gene3D Cation efflux protein transmembrane domain 131 395 IPR027469 -
Lele41g1117 474 MobiDBLite consensus disorder prediction 264 328 - -
Lele41g1117 474 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 402 473 IPR036837 -
Lele41g1117 474 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 100 474 - -
Lele41g1117 474 Pfam Cation efflux family 135 396 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1117 Lele-ChrLele41 20286931 20289662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1117 78 474 Inorganic Solute Cotransporters AT2G46800 69.750 0.0 517