Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1115 ATGGAGAGGCTTCAAGGACCCATCAATTCCTGTTTCTTTGGTGAGCATTTGGGAGTGAACTGCTTCCAGCAATGTCTGATTGAGAACGAAGATGAAGAAGAAGAACTTTTGATATCAGTATCAAGTTTGGAGGATAAAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAATTTTTTCCCTTCAAAGATTCCAACTTCCAGTTTCAGACACTTATGAACCAGAAGAAACCATGCGGAGAAGAGAGGGAAAAAACGTGCTTATCTAGAATGATAACGGAGAGCCAAGTTCACGCGCCGCCGGAGCGAGAGAGCTGTGTCACCCACGAGACGGCGGAGATGCCATCGTCGCAGTCGCCGGCGAAATCTGAGAACTATAGGAGAAAGAGGAAGAGGACGAGACCAATTAAGAGCAAGGAAGACGTGGAGAATCAACGCATGACCCATATTGCCGTCGAACGCAACCGCCGCCGACAAATGAACGACCACCTTAGTGTTCTCAAATCACTCATGCCCCCTTCCTATATTCAAAAGGGGGACCAAGCGTCCATAGTTGGGGGTGCAATAGATTTTGTGAAGAAATTAGAGCAACTTCTTCAATCCCTGGAGGCACAGAGAAGAATGAGAAGGAACGATGAGATTGGATTCAGCTATGGAACGACGTCGTCGCGTGGAGAAGAATTTAAAGCAGAGAACAAGTCAGAATTTGCAGAAACAGAGGTAACTGTGATTCAAAACCATGTGAACCTGAAAGTTCAGTGCAAGAGAAGAACAGGGCAGTTAGTGAAGGCCATAATGGGAATTCAGGATCTTAGGTTAACAATTCTGCACCTAAACATAACTTCTTCACAAGACTCTGTTCTCTATTGTTTCAATCTCAAGATTGAAGAAGAGTGTAAAGTAGTGACAGCAAGTGAAATTGCAGGAGCAGTTCAAGAGATGTTTAGGTTCATCAATGGAAGCAGCTAA 981 0.4455 MERLQGPINSCFFGEHLGVNCFQQCLIENEDEEEELLISVSSLEDKMPFLEMLQSVESQTPQFFPFKDSNFQFQTLMNQKKPCGEEREKTCLSRMITESQVHAPPERESCVTHETAEMPSSQSPAKSENYRRKRKRTRPIKSKEDVENQRMTHIAVERNRRRQMNDHLSVLKSLMPPSYIQKGDQASIVGGAIDFVKKLEQLLQSLEAQRRMRRNDEIGFSYGTTSSRGEEFKAENKSEFAETEVTVIQNHVNLKVQCKRRTGQLVKAIMGIQDLRLTILHLNITSSQDSVLYCFNLKIEEECKVVTASEIAGAVQEMFRFINGSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1115 326 MobiDBLite consensus disorder prediction 113 148 - -
Lele41g1115 326 Pfam Helix-loop-helix DNA-binding domain 149 200 IPR011598 GO:0046983
Lele41g1115 326 PANTHER MAX DIMERIZATION, MAD 100 322 - -
Lele41g1115 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 199 IPR011598 GO:0046983
Lele41g1115 326 CDD bHLH_AtFAMA_like 151 224 - -
Lele41g1115 326 Gene3D - 147 219 IPR036638 GO:0046983
Lele41g1115 326 Coils Coil 196 216 - -
Lele41g1115 326 SMART finulus 154 205 IPR011598 GO:0046983
Lele41g1115 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1115 Lele-ChrLele41 20281719 20283771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1115 38 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 47.059 8.61e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele41g1115 HLH 6.2e-11 No_clan