Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1113 ATGGCTCCTTCCTTGAAGTCCCACTCCGTCCTCGCCAACGGCGAATCAAACCACCACAAGCAACCACTTTCCGGAAACATACAAGAAGACGAAGAGAGCTTCATCTCCGCCATGCAACTCGTGTCCTCCTCTGTTGTCTCCGTGTCTCTGCAAGCCGCCTTCGAGCTCGGCATCTTCGACGCCATCGCCGGAGCCGGCGAGGACTCAAAGCTCTCTGCAAAGGACATAGCTTCCTTGGTATCCTGCACCAACCCAGAAGCTCCGACCATGCTTGATCGTCTCCTTAGTCTCCTGGGCAGCCACTCTGTTCTTCACTGCTCCGTCGTTGACGATCAACAAGGAAAAAAACAGAGGATTTACAGCCTCACCCCTGTTTCTAAGCACTTCGTTTCAGATTCTAATGGCGTCTCTATGGGAAATCTCCTGTCCCTGATCCAAGACAGAGTCTTCGTGGAAAGCTGGAGGGAGTTGAAGGGAGCGATAAAGGAAGGAGGGATAGCATTTAACAGAGTACATGGGATGCATGCGTTTGAGTATCCAAGTAAGGATGCGAGGTTCAACGATGTTTTCAACAAGGCAATGTATGATTCGACGATTCTGATAATGAGCAACATTCTTAAAGTCTACAATGGATTTGAGGCACTCGACAGAGTCGTAGATGTAGGTGGTGGTCTTGGGATTAACCTTGACTTGGTCACTTCCAAGTACCCTCATATACAGGGCATCAATTTTGATCTGCCTCATGTCATCCAAAATGCCCCTCCCTACCCTCGGGTACAACATGTGGGAGGAGATATGTTTGAGAGTGTTCCTCAAGGACATGCCATTTTTATGAAGTGGATACTGCATGATTGGAGCGATGAACACTGCGTGAAGCTGCTGAAGAATTGCCACAAGGCGATTCCAGAAGATGGAAAAGTGATTATAGTGGACGCGATTCTACCAGATGAGCCAAACACGAGTTGTGCTCTCAAAAGTGCTCTTCAAGGAGATGTTCTAATGATGGCCCAGAATCCTGGAGGCAAGGAACGAACCCAGGAGGAGTTTCTGGATTTGGCTACTAGCTCCGGGTTCAGAGGGATCCGATTCGTCTGTCGGGTTTGTGGATTTTGGGTCATGGAGTTCTACAAGTAA 1134 0.4885 MAPSLKSHSVLANGESNHHKQPLSGNIQEDEESFISAMQLVSSSVVSVSLQAAFELGIFDAIAGAGEDSKLSAKDIASLVSCTNPEAPTMLDRLLSLLGSHSVLHCSVVDDQQGKKQRIYSLTPVSKHFVSDSNGVSMGNLLSLIQDRVFVESWRELKGAIKEGGIAFNRVHGMHAFEYPSKDARFNDVFNKAMYDSTILIMSNILKVYNGFEALDRVVDVGGGLGINLDLVTSKYPHIQGINFDLPHVIQNAPPYPRVQHVGGDMFESVPQGHAIFMKWILHDWSDEHCVKLLKNCHKAIPEDGKVIIVDAILPDEPNTSCALKSALQGDVLMMAQNPGGKERTQEEFLDLATSSGFRGIRFVCRVCGFWVMEFYK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1113 377 CDD AdoMet_MTases 217 314 - -
Lele41g1113 377 Gene3D - 13 129 IPR036388 -
Lele41g1113 377 SUPERFAMILY "Winged helix" DNA-binding domain 29 132 IPR036390 -
Lele41g1113 377 MobiDBLite consensus disorder prediction 1 28 - -
Lele41g1113 377 FunFam Caffeic acid O-methyltransferase 130 377 - -
Lele41g1113 377 Pfam O-methyltransferase domain 154 359 IPR001077 GO:0008171
Lele41g1113 377 Pfam Dimerisation domain 49 98 IPR012967 GO:0046983
Lele41g1113 377 MobiDBLite consensus disorder prediction 9 28 - -
Lele41g1113 377 Gene3D Vaccinia Virus protein VP39 130 377 IPR029063 -
Lele41g1113 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 376 IPR029063 -
Lele41g1113 377 PANTHER O-METHYLTRANSFERASE 37 375 IPR016461 GO:0008168
Lele41g1113 377 FunFam Caffeic acid 3-O-methyltransferase 15 129 - -
Lele41g1113 377 PIRSF O-mtase 16 377 IPR016461 GO:0008168
Lele41g1113 377 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 38 377 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1113 Lele-ChrLele41 20265904 20268175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1113 30 377 Monolignol Biosynthesis Gene Families AT5G54160 52.011 6.39e-133 383