Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1111 ATGGACGCATACTCTTCTGGAGAAGAAGTGGTTGTCAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAAGTTCGTAGAAGCTCTAAAGCTCTATGGAAGAGCATGGCAGCGCATAGAAGAACATATAGGAACAAAGACCGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAAGGTGTTCCAATTGGACAATCTATCGACATAGACATACCTCCTCCACGACCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACTAGTGCTGGTGCCCAAACATCACATGGTGGACGAAAGGATGGAAAACCTCTTGTGTCAGTTTCATCTTCACATTGTAAACATGTACTGGACTTGGAGAAGGAACCACATCCAGAGGATGCGCCCTGTTCCTTTGTTACATCAGCAGACACGAGTTCAATGTCAGTGCTACTGAAAAATCCATGCAACTTAAGGGAGTTCATGCCTTTGGCAAAAGAATTGATAAGTCGGGATGAAACGGATGAGTCTTTTGTCACTGCTGAACTAAAAGAAAATCAGAAGTTGGAGACATGTGCTGAAAGGAAACACACAGAACAGAGTAATGGCACAAGTAAAGCTTCTAAGATGGAGGATTCTGATGCTTCACATGCAAAATTGGTTCAGAGTAAGAAAACAGATGATCCTAATTTTGCATTGACAATAAAAGGGAGGCAAGGAAATCAGAACTACCCAAGACATGTCCCTGTGCACGTTCTTGATGGGAAACTTGGAACAGGTACTCAAAATCCACCCCAGGATATGTTGTTTCCAGAATCTATATTTCATCCCATGGGTGGTGGGGTTAACGGGCAACCTAATATTTTCACAAATGCATCTGTATCAAATGCAAGTGAAAGTCAAAATAACTCATCACAATCTTCAATTTATCAATCATTTCCCACATATCCTCCTCCATTCCCACAAATTCACCAGAATCAAGAACACTACCAATCATTTCTTCAAATGTCCTCCACATTTTCTAGTCTAATTGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCCTATGCAAATATAGAAACTTCTGCAGATTCTCCAGCATGCTTGCAAGGAGCCTTTCCATCTAGGCAAATTGGCTCTCCTCCAAGTATGGCAGCTATTGTAGCTGCTACCGTGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGATTTCTTCCTTTGTGTGCCCCCTTCCATTCTGCTTTTCCTTGCCCTCCTCCATCAGCCGCGGCAGTTCCATCAATGGATAATGGTGAAATACCAGCAGCCAAAACAGAGCAAGGTGGTGAAGCTACTCTCCAGACTCCTCTGCAAGATCAGGATCCAGAATGCACAGATGCTCTGCAAGCTCAACATTCAGCTTCTAAGTCAGCAGCTAATTCTTCATCAGAGCCAGAGGAAAGTGAAGCTAAGATGGATACTTCCTCAAAGGCTACTGATCATGAGAAGAACAAAGCAAATACTGAGCACCTTGACTCTAACAAAATGAAAGGCAGAAAACTGGTTGACCGTTCCTCATGCGGTTCCAATACCACCTCTAGCAGCGAGGTAGAGACAGATGCATTAGAGAAGAATGAGAAAGAGAAAGAGGAAATCAAAGAACCTGATGCACACCGTTTAGCTATTGACTCCAGATATCGTCGTGCTAGAAGTGCTGGCAGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGAGGCTGGCCTTTCAGGCTCTCTTCTCCAGGGAGGTGTTGCCACAGAGCTTTTCTCCTCCGCATGACTTGACAAATCAGGATCATCAGATGGACAACATGGAGGATAACAAGCATAATATGGATGATAAACTAGACAACATCAAGAAATTCTGTTGCGAGTGTAGAGGAGCGGAGAAAAACCTGTCATTGGTCCAAAAACATGTTGAGCAAGAGGTACTGCTAACCATAGGGCTTGGACAAGGAAAGCTCAAGACTAGTCGAACAGGGTTTAAACCTTACAAGAGATGTTCAATGGAAGCCAAGGAAAACAGCGTTGGAACCGGCAACCAAGATGAAGAGAAAGGTGCCAAGAAAATACGCTTGGAAGCGGAGGCTTCAACTTGA 2193 0.4432 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNKFVEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQSIDIDIPPPRPKRKPSNPYPRKTSAGAQTSHGGRKDGKPLVSVSSSHCKHVLDLEKEPHPEDAPCSFVTSADTSSMSVLLKNPCNLREFMPLAKELISRDETDESFVTAELKENQKLETCAERKHTEQSNGTSKASKMEDSDASHAKLVQSKKTDDPNFALTIKGRQGNQNYPRHVPVHVLDGKLGTGTQNPPQDMLFPESIFHPMGGGVNGQPNIFTNASVSNASESQNNSSQSSIYQSFPTYPPPFPQIHQNQEHYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANIETSADSPACLQGAFPSRQIGSPPSMAAIVAATVAAATAWWAAHGFLPLCAPFHSAFPCPPPSAAAVPSMDNGEIPAAKTEQGGEATLQTPLQDQDPECTDALQAQHSASKSAANSSSEPEESEAKMDTSSKATDHEKNKANTEHLDSNKMKGRKLVDRSSCGSNTTSSSEVETDALEKNEKEKEEIKEPDAHRLAIDSRYRRARSAGSLPDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNQDHQMDNMEDNKHNMDDKLDNIKKFCCECRGAEKNLSLVQKHVEQEVLLTIGLGQGKLKTSRTGFKPYKRCSMEAKENSVGTGNQDEEKGAKKIRLEAEAST 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1111 730 MobiDBLite consensus disorder prediction 483 502 - -
Lele41g1111 730 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lele41g1111 730 MobiDBLite consensus disorder prediction 701 730 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 503 539 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 483 574 - -
Lele41g1111 730 Gene3D - 26 73 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 709 730 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 447 466 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 205 259 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 541 555 - -
Lele41g1111 730 CDD SANT 26 69 IPR001005 -
Lele41g1111 730 MobiDBLite consensus disorder prediction 556 574 - -
Lele41g1111 730 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lele41g1111 730 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lele41g1111 730 SMART sant 23 71 IPR001005 -
Lele41g1111 730 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lele41g1111 730 MobiDBLite consensus disorder prediction 223 237 - -
Lele41g1111 730 MobiDBLite consensus disorder prediction 85 127 - -
Lele41g1111 730 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lele41g1111 730 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lele41g1111 730 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lele41g1111 730 Coils Coil 626 646 - -
Lele41g1111 730 PANTHER SWI/SNF COMPLEX-RELATED 7 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1111 Lele-ChrLele41 20245036 20252963 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele41g1111 Myb_DNA-binding 4.3e-13 CL0123