Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1110 ATGTTAGTTTCTGTTCTTTATGGAGTACTCCTTGTGTGCTTGCCTTTTTCTTGTGGTTCCTTTGAGAACCAAGAAAAGGTACTAGAACCATCATCCACTAATTTACTTCCCAATTCCTGCAACGAAACATGTGGGAAACACCATGTTCCTTTTCCATTCTACGTGAACTCGTCTTGTGTGTCAATTTCTCATGCTTTCAATCTCTCTTGCTCGAATTCCTCTTCGCTTATGCTCAGAATCGGCTCAGAAAACTACCCTGTGATTGAATTCTTCCCTGATGGTGTCCTAGTGGACTTCCCAGGCACATTATCGTGTCGTCATTACAATGACCTGAACTCGTTTGGTAAAAGTTTTGTGAGAAACGAACACTTTGGCGTCTCAGTGGATAATGTCATTGGTCTCTATGACTGTGAGGATTCTTCTCTGTGCAAAGCAGATTGTGAAACAGTTGACTTGCTGGGTTGTGATGGAAACGATGATGGTGGAGGTGGTTCACTTGGGTGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTCTCTGAGTATGGATGCAGGGGATTTGCTAGTTGGGCTGTTCTGAGAGGGTCAAATTCTGGAAAGCGAGGGGTAAAATTGGAGTGGGCTATTCCTAAGAACTCATCCGTGGAAGTTTGCTCAAGTAATGCAGAAATGGTCAATGCTACGTCTGTTGAAGGTGGAGCAAGGTGTATGTGTCAAAATGGATATGTTGGTGATGGATTTGCAAATGGAACTGGATGCTTGCAGGTTTCTGGACAAAGTGCTTTGAAGTTTTACGATCTTTTAGAACTTACTCAATTCAGATTTGACATTGTCTTCCTCTTTGATGCATCTATTAATGCAGCCTGTGTCAAGGATGGGCATGAAGCATATGGCAGTGATTGCAACATCAGAAGGAAAGATCAAAGAAAATTTGTTATTATCCTTGGAATCCTTGGTCCAGTTCTTATTGTTGCCTCCATGATAGCACTATTTTATCTACTTAAAAGAGCACAAAAACCAGGCACGTTTGACAATGACCAGGCTTACTATCACAACACCTCCTTTCAAAAGGCTTGTAGAACTCAATTGTTCAGCCTCCACGAACTCGGTGAAGCCACGAAAGGTTTCGCCGAGGATCAGAAACTCATGCACAGCAACAACAATGGTACGATTTTCGCCGGAGTTCTTGGGGATGGATCACATGCAGCTATCCACAAGTTGCAATATGATACTGAGAAAGACCTTATGGAAGTCCTAGCACAAATTGAGGTTCTATCTGCTATTTCACATAAGAATTTGTCCCGCCTTCTCGGTTGCTGTATAGATTCCGGCTACCCTTCTTCAGTTGTCTACGAATATCCTGCAAATGGTACCTTGGAGGATCATTTACATCAAAGAAAGGGACACAAACTTTGTTTGGAATGGAACAGGAGATTGACTATTGCTGCAGAAACTGCTAGTGTTCTTGCTTTCTTACAATATGATATTTCTCCTCCAATATTCCACCAAAACCTTAAACCTGGTTGCATATTCCTAGATGGTGATTTTTCTGTCAAGATTGCAGGATTCAGACTAGTGAATACCAAATTCAACTATCACTATGACAATAACAACAACATTGATCAAGGCTTGCATTTCTGCAAGAATGACGTTTATGACATGGGAGTGCTGCTTCTTGAGATCATTTCAGGCTCAAATAATAATCACTTGAACAACTCACCAACTCAAGCACTTCAAAAGATTAGGACAGGGAAGCTCGAAGAAATCATCGATCCCTTACTCTACTACCACGAGCAACCTCGTACTTGCCAAGAACAGATACAGATAATAGCGGACCTTGCAACAAGATGTATGTTGTTTGGTGCAGATGGAAAGATGGGGATGATTGATGTTGCAAGAGAGTTGACACACATAACAAAAGAGAGTGTTGCTGATGGAGGAATCACAAAAGGACCTGTTTTGGAAGTGACATTCTCAAATTCTAGTCTTCTTCAGATGATATCAATGTCTCCTGATTCTATGCGTTTTCAGACCAATTTTTCCCTCACCGTCATCGAAAACAAAGGCTTAAAATTTCCTTTTCCTTGTGTGTCATGTCCTAAGATGAGTCAGCAAGAACAGAATAATGCTGAAGCTAACGACAGCCGTCCTCGTTTGAATCAAAGGATTCTTTCATCTTTGTCAAGAAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGACCTGATGCTCCCAACATTTTCAATTGTGTTGTGGAAATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGGATGATCAAGGTTGATCGCATTCTGTATTCATCAGTTGTTTATCCTCACAACTATGGCTTCATTCCTCGTACTCTTTGTGAAGATAATGACCCACTTGATGTCTTGATCCTTATGCAGGAGCCGGTTCTTCCTGGTTGTTTCCTGAGAGCCAGGGCCATTGGACTGATGCCTATGATTGACCAGGGAGAGACCGATGATAAAATTATTGCAGTATGTGCTGATGATCCAGAGTATAAGCACTACAATGACTTCAAAGAACTTCCACCTCATCGCCTCTCTGAAATAAGGCGCTTCTTTGAAGATTACAAGAAGAATGAGAATAAGGAGGTAGCAGTTAATGACTTTTTGCCTCCTTCTACTGCCGTTGAAGCCATCCAGTACTCAATGGATCTTTATGAAGAGTATATTCTGCGCTCCTTGAGGCAATAG 2766 0.4168 MLVSVLYGVLLVCLPFSCGSFENQEKVLEPSSTNLLPNSCNETCGKHHVPFPFYVNSSCVSISHAFNLSCSNSSSLMLRIGSENYPVIEFFPDGVLVDFPGTLSCRHYNDLNSFGKSFVRNEHFGVSVDNVIGLYDCEDSSLCKADCETVDLLGCDGNDDGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFASWAVLRGSNSGKRGVKLEWAIPKNSSVEVCSSNAEMVNATSVEGGARCMCQNGYVGDGFANGTGCLQVSGQSALKFYDLLELTQFRFDIVFLFDASINAACVKDGHEAYGSDCNIRRKDQRKFVIILGILGPVLIVASMIALFYLLKRAQKPGTFDNDQAYYHNTSFQKACRTQLFSLHELGEATKGFAEDQKLMHSNNNGTIFAGVLGDGSHAAIHKLQYDTEKDLMEVLAQIEVLSAISHKNLSRLLGCCIDSGYPSSVVYEYPANGTLEDHLHQRKGHKLCLEWNRRLTIAAETASVLAFLQYDISPPIFHQNLKPGCIFLDGDFSVKIAGFRLVNTKFNYHYDNNNNIDQGLHFCKNDVYDMGVLLLEIISGSNNNHLNNSPTQALQKIRTGKLEEIIDPLLYYHEQPRTCQEQIQIIADLATRCMLFGADGKMGMIDVARELTHITKESVADGGITKGPVLEVTFSNSSLLQMISMSPDSMRFQTNFSLTVIENKGLKFPFPCVSCPKMSQQEQNNAEANDSRPRLNQRILSSLSRRSVAAHPWHDLEIGPDAPNIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQEPVLPGCFLRARAIGLMPMIDQGETDDKIIAVCADDPEYKHYNDFKELPPHRLSEIRRFFEDYKKNENKEVAVNDFLPPSTAVEAIQYSMDLYEEYILRSLRQ 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1110 921 Coils Coil 710 730 - -
Lele41g1110 921 FunFam Soluble inorganic pyrophosphatase 4 739 917 - -
Lele41g1110 921 Gene3D Inorganic pyrophosphatase 739 917 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 Gene3D Laminin 223 257 - -
Lele41g1110 921 Gene3D Transferase(Phosphotransferase) domain 1 463 655 - -
Lele41g1110 921 ProSiteProfiles Protein kinase domain profile. 385 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1110 921 SUPERFAMILY Protein kinase-like (PK-like) 368 643 IPR011009 -
Lele41g1110 921 SUPERFAMILY Inorganic pyrophosphatase 737 916 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 CDD pyrophosphatase 756 909 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 Hamap Inorganic pyrophosphatase [ppa]. 756 912 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 PANTHER INORGANIC PYROPHOSPHATASE 708 920 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 Gene3D Phosphorylase Kinase; domain 1 349 461 - -
Lele41g1110 921 ProSitePatterns Inorganic pyrophosphatase signature. 807 813 - -
Lele41g1110 921 Pfam Wall-associated receptor kinase galacturonan-binding 40 89 IPR025287 GO:0030247
Lele41g1110 921 Pfam Inorganic pyrophosphatase 760 911 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lele41g1110 921 Pfam Protein tyrosine and serine/threonine kinase 396 593 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1110 Lele-ChrLele41 20230871 20237481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1110 40 646 Receptor kinase-like Gene Family AT2G23450 27.769 8.81e-49 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Lele41g1110 PK_Tyr_Ser-Thr 3.7e-16 CL0016