Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1096 ATGGAGGATCGAGGAGTTTTGCCAGGGGTGTTCATCAGCACCTGCATTCTGGGTTGGATGCTCATTGCCGTCAATGGAGAGACAGATCAGACTGATGCTGCGGCTTTACAGGCCATGTTTAATGGAATGAACTCACCATCCCAACTAGGTTGGACAGCAAATGGTGGAGATCCCTGCGGACAGCCTTCTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTTGGTTACCAGTTACAAACCATGACATCGGTGACCAACCTAGATATGAGTCACAATAGTTTTGGAGGTGGCATGCCATACCAACTTCCACCAAATTTGCAGAGATTAGATCTTTCCAATAACCAATTTACTGGGAGTTTACCGTACTCAATTAATGATATGACTTCTCTTACATACCTAAATGTTGCTCGCAATCAACTACAGAATGGACTGAGTGACGTGTTTCAAAAGCTTTCTAAGCTAGCCACACTGGATCTCTCTTTCAATTCTATGTCAGGCAGCCTCCCTCAGGGTTTCAGCTCACTTTCAAGCATAAGCAGCATGTATCTGCAAAACAACCAGTTTACAGGGACTATTGATGTCCTCGCCAATCTGCCTCTTGATAATCTGAATGTGCAAAACAACCGTTTTACAGGCTGGATACCGGAACAGCTGAAAGGCATTAACCTCCAGACATCGGGAAATACATGGAACTCAGGTCCTGCCCCGCCTCCACCTCCTGGGACACCCCCTGCAACTAGAAGGAACCGGCATCACAGATCTGATGGAAGTAATAGCTCTTCAGATGGTGGCAACAGTGATGGGGGGACAAAATCTGGTATAGGAGCCGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCAGTAGTTGCTTTCTTTTTGATGAAAAGAAAATCCAGGAGGTCATCTTCAGATATAGAAAAGCATGACAATGAGCCTTTTGCTCCTCTTAATTCAAACGAAGTGCATGAAGTGAAGTCCGTGCAAGCTCCCCCAGTGGTTGACGTGAAGACATTTGATACTTCTGCCTCAATAAATATTAAACCCCCACCTATTGAACGTCACAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCTGCAAATGTGAAATCATATTCTATAGCAGACCTACAGATCGCCACTGGGAGCTTCAGTATGGATAACCTCCTTGGGGAGGGATCTTTCGGACGTGTTTATCGTGCTCACTCTGATGATGGAAAGGTTCTTGCTGTGAAGAAAATTGATTCATCTATCCTTCCCCATGATTCAGATGATTTTATGGAAATTGTTTCAAACATCTCCAACTTGCACCATCCAAATGTGACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGCGGATCACTACATGACTTCCTTCACTTATTAGATGAATATAACAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCGCCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGCGGAGCTCAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCTAATGCTGACCAGGTCTTGAACCGTAATGCTGGATCTGGGTATGATGCACCTGAAGTTGCTTTGTCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTCGATAGCTCAAGACCAAGATCTGAGCAATCTTTGGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTCTGGAGGGGCTATACCCTGTTAAGTCCCTTTCTAGATTTGCTGATGTCATTGCTCTCTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCTGAGGTGGTTCAAGCGTTGGTTCGCTTAGTGCAGCGAGCTAACATGAGCAAGAGAACATTTGGAACAGATCAAGGAGGAGGATCCAATCGAGGAGGCGATGATCAAGACACACAAGATATGTAA 2154 0.4396 MEDRGVLPGVFISTCILGWMLIAVNGETDQTDAAALQAMFNGMNSPSQLGWTANGGDPCGQPSWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTNLDMSHNSFGGGMPYQLPPNLQRLDLSNNQFTGSLPYSINDMTSLTYLNVARNQLQNGLSDVFQKLSKLATLDLSFNSMSGSLPQGFSSLSSISSMYLQNNQFTGTIDVLANLPLDNLNVQNNRFTGWIPEQLKGINLQTSGNTWNSGPAPPPPPGTPPATRRNRHHRSDGSNSSSDGGNSDGGTKSGIGAGGIAGIVISILLVGAVVAFFLMKRKSRRSSSDIEKHDNEPFAPLNSNEVHEVKSVQAPPVVDVKTFDTSASINIKPPPIERHKSFDEDEFSKKPIIVKKTVKAPANVKSYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSDDFMEIVSNISNLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLLDEYNKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGGSNRGGDDQDTQDM 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1096 717 PANTHER LEUCINE RICH REPEAT KINASE 2 72 690 - -
Lele41g1096 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Lele41g1096 717 Pfam Leucine Rich repeats (2 copies) 118 154 IPR025875 -
Lele41g1096 717 Gene3D Ribonuclease Inhibitor 29 251 IPR032675 -
Lele41g1096 717 SUPERFAMILY Protein kinase-like (PK-like) 396 683 IPR011009 -
Lele41g1096 717 MobiDBLite consensus disorder prediction 694 710 - -
Lele41g1096 717 Gene3D Phosphorylase Kinase; domain 1 375 488 - -
Lele41g1096 717 SUPERFAMILY L domain-like 29 233 - -
Lele41g1096 717 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 697 - -
Lele41g1096 717 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lele41g1096 717 MobiDBLite consensus disorder prediction 694 717 - -
Lele41g1096 717 Gene3D Transferase(Phosphotransferase) domain 1 490 702 - -
Lele41g1096 717 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Lele41g1096 717 CDD STKc_IRAK 418 686 - -
Lele41g1096 717 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Lele41g1096 717 Pfam Leucine rich repeat 160 202 IPR001611 GO:0005515
Lele41g1096 717 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 488 - -
Lele41g1096 717 MobiDBLite consensus disorder prediction 238 284 - -
Lele41g1096 717 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1096 Lele-ChrLele41 20065038 20070599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1096 10 716 Strubbelig Receptor Gene Family AT1G53730 66.158 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele41g1096 PK_Tyr_Ser-Thr 2.4e-42 CL0016