Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1090 ATGGGTGACTCATTAGTGTCTAATGACAAATTGAGCGAATCTCCCGGAGTTGAAGTGACCGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTTTGTTTGTTCTGTTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACCCCTCCGCCGCCTCGTCGTCGCCGTCGACGCCGCTTTGTCTTCGCCCCTGGGCAAGATCCAGCAATCTACGGCGGCCAGAGAAGTGGACTCGATCCTTCACTGCTTTTGTCCTTACCAGTAATAATTTACCAACCTGAAAATTTCAAAGATGGCTTGGAATGTGCTGTTTGTCTCTCCGAGCTTGTTCAAGGAGAAAAAGCGAGGCTTTTACCCAAATGCAATCATGGATTTCATGTGGATTGTATAGATATGTGGTTTCAATCACATTCCACTTGTCCTCTCTGTAGAAACCCAGTCACTTCTGAAACTCCTAAATTCAATAGCAGTTCAAGTGTTCGAGAAAATTCCGCAGAGAATACTAGTAGCCCGTCACAAGCGTCAGAAAATTTTCAAAACTCAACTTTAGCTGCTATGAGTGGTTCAGTTTCAGAGTCTCCAAAATTTCCAACTAATGTGTTGGTTTGGGGGAATCAGACTCAAGTTAGTTCTATTAATACATCTTCAGAAGAAGAGGGTCCTTCTTCTTCATCTTCTCCTTCTTCTTCTTCTACTACAGCTACTAGCAGTAGCAGTAACAATAGACGCCTTGAAATGATGGTGATTGATATACCAAGTGAGGTGAATTCTTCATCTTTATCTCCTTCTGCAAACAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGACTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTGTAATCCTGGTCCTGGCTCTATAGATGTGGAACAAGCAGGGAGAGGACAGAGCTAG 966 0.4358 MGDSLVSNDKLSESPGVEVTGKIMVLAIIILFMVVLFVLFLHLYAKWFWWSIEETTPPPPRRRRRRRFVFAPGQDPAIYGGQRSGLDPSLLLSLPVIIYQPENFKDGLECAVCLSELVQGEKARLLPKCNHGFHVDCIDMWFQSHSTCPLCRNPVTSETPKFNSSSSVRENSAENTSSPSQASENFQNSTLAAMSGSVSESPKFPTNVLVWGNQTQVSSINTSSEEEGPSSSSSPSSSSTTATSSSSNNRRLEMMVIDIPSEVNSSSLSPSANRFAEDELKSPMTTRLRSLKRLLSRDKRLGPCNPGPGSIDVEQAGRGQS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1090 321 MobiDBLite consensus disorder prediction 218 321 - -
Lele41g1090 321 MobiDBLite consensus disorder prediction 280 299 - -
Lele41g1090 321 SMART ring_2 110 151 IPR001841 -
Lele41g1090 321 MobiDBLite consensus disorder prediction 158 185 - -
Lele41g1090 321 MobiDBLite consensus disorder prediction 218 252 - -
Lele41g1090 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 161 IPR013083 -
Lele41g1090 321 CDD RING-H2_EL5_like 109 152 - -
Lele41g1090 321 Pfam Ring finger domain 109 152 IPR001841 -
Lele41g1090 321 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Lele41g1090 321 FunFam RING-H2 finger protein ATL3 79 157 - -
Lele41g1090 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 249 - -
Lele41g1090 321 SUPERFAMILY RING/U-box 93 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1090 Lele-ChrLele41 20040393 20041358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1090 1 299 C3H Transcription Factor Family AT1G53820 44.586 9.79e-74 228