Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1087 ATGTTGAGTAGTGTACACTGGCGTTTCAAATTCCAGCATCTGGCTTTGGTTATTATGTGTACTGCAATTTTGATTGGATTTACAGATTTGGAGGGAGAGAAGGGAAGTGTGAGATCGTACCTTGGGAGGCCATGGAGGGAATATCCAAGGACAGTAGTAATGAAGAGTTATATAGACGATGTGATTCTTCGCCCAGAAGGGTGGCCCCTTTGGGATGGGGATTTTGCGTTGGACACTTTGTACTATGGAGAGCATCACAACACTGGAAATGGTGCTCATACGTCTGGAAGGGTTAACTGGAAAGGCTTTAAGGTTATTACCAGTTCTTTTGAAGCTCAAAGTTTTACTGCTCAAAACTTCATTGCTGGTTCAACCTGTTTACATTCCACAGGCTTTCCATATCCTCTTGGCCTATATTAA 420 0.4286 MLSSVHWRFKFQHLALVIMCTAILIGFTDLEGEKGSVRSYLGRPWREYPRTVVMKSYIDDVILRPEGWPLWDGDFALDTLYYGEHHNTGNGAHTSGRVNWKGFKVITSSFEAQSFTAQNFIAGSTCLHSTGFPYPLGLY 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1087 139 Pfam Pectinesterase 21 123 IPR000070 GO:0030599|GO:0042545
Lele41g1087 139 Gene3D - 16 138 IPR012334 -
Lele41g1087 139 SUPERFAMILY Pectin lyase-like 28 136 IPR011050 -
Lele41g1087 139 PANTHER PECTINESTERASE 23 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1087 Lele-ChrLele41 20028370 20029935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1087 12 138 Carbohydrate Esterase AT3G14310 57.031 8.23e-40 138