Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1079 ATGCCGATTCATGCATCCCTCTATATAATTACCACTTCATATGAAACTATACGCTTTGAAGTTCATCACACAGAACCTCACAGAAATACGATAAATTCTGTGATGCAGGGAGAAGGATCGTCAGGTTCTTCAGACGGTAATATCTTCGTCGACGAATTCTACTTCTCGGCTCTTTTTGATGAAGATGACATCTTTCCAATCTCCGATGAGAAATATGCAGGACAGATACAACTGCAAGAGGCCCTCATGTCCTCAGTTATAATGTCGAGGACAATGAGATACGATGATGATGATGATGAGATTAACGTTATTAATAATGTCGAAGATTCTTCCAGAAAGGAGAAGATGAAGTTAGAGACTGGCTGCATTTCATCCTACATGGCGTCGAAGCTTCAAGAGAACATATCAATGGTGAAATGCCCTGACCCAAAATGCCGAGGCATTGTAGAGCCACTCTTTTGTCGATCCATCATCCCAGAGGAGTTATTTGAGAGATGGGAAAATCCAGTGTGCGAGAATCTGATTCTTGGGAGGCTGTTCTGTGCTCAGTCCAAGGTGGCGTGGCACGCTGGGATGGACTGCACAGCGTTTCAGAGTCAGAAAATGGATCAGACACAGAACAATGATCTGCTGAAGGAACTGGCGAAGAATAAGAGATGGAGGAGATGCGCTCAATGCAGATTTTTTGTGGAAAAGATTGATGGATGCTCTCATATTTCCAGCAGTTTCAATACTGCCCTTGGACCTCCTAATAATGAGCTTAATGGGTGA 771 0.4332 MPIHASLYIITTSYETIRFEVHHTEPHRNTINSVMQGEGSSGSSDGNIFVDEFYFSALFDEDDIFPISDEKYAGQIQLQEALMSSVIMSRTMRYDDDDDEINVINNVEDSSRKEKMKLETGCISSYMASKLQENISMVKCPDPKCRGIVEPLFCRSIIPEELFERWENPVCENLILGRLFCAQSKVAWHAGMDCTAFQSQKMDQTQNNDLLKELAKNKRWRRCAQCRFFVEKIDGCSHISSSFNTALGPPNNELNG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1079 256 Coils Coil 251 256 - -
Lele41g1079 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 174 IPR013083 -
Lele41g1079 256 SUPERFAMILY RING/U-box 121 173 - -
Lele41g1079 256 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 120 240 IPR031127 GO:0004842|GO:0016567
Lele41g1079 256 Gene3D - 192 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1079 Lele-ChrLele41 19977107 19978569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1079 138 250 C3H Transcription Factor Family AT2G19610 25.424 2.35e-06 46.2