Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1076 ATGTGTGGAGGTGCTATTATCTCCGACTTCATACCGGCGGCGGCGGCGGCGGCAGCCGGAACAGGGAGGAGGTCTCGCCGGCTCACTGCCGATTATCTATGGCCAGATTTGAACAAGCTTGGTGCTGGTAGGAGGTTTTCCAAGCCACTGAAGCCTGAAACTGTCATCGACATGGACGACGATTTTGAAGCCGATTTCAGGGAATTCAAGGACGATTCCGATATTGATGTTGATGAAGATGATGATGAATTGATGATTGATGTCAAACCCTTTGCTTCATCCGCCACTAAGTCCTCTAAAAGGCCCGTGTCTCGTGGATCTGCTGCTGCAAAAACTGAGAAATCCGATGTGCAAGCTGAGAAGTCTTTGAAAAGGACGAGGAAGAATCAATACAGGGGAATCCGCCAGCGACCATGGGGCAAATGGGCGGCTGAGATCCGCGACCCGAGAAAGGGTGTTCGTGTCTGGCTCGGAACCTTCAATACTGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAGGCAAGAAGGATCCGCGGCAAGAAAGCCAAGGTCAACTTCCCTGATGAGGTCTCAGGCAATTCGTCAAAGCGTATCAAGACCAGCAAAGTCGAGAAGCCGCTTCCAAAGGCCAATCTGACCCAAAACTTCAATGCTGGAACCAATCTGGAGGACTATTACTACTCCATGGGTCTGATGGAACAGAAACCACAGATCAACAACCAGTTTGCTGCTCCTGCTACTGCTAACATGGGCTCATTCCCTGAGACTAACAATGTGGTCCCATCAATTGCATCCTCTGATGATGTCACTGTTTACTTCAGTTCCGATCAGGCCAGCAACTCATTCGACTACTCTGATTTCGGATTTGGCGAGCAGGCTCCAAAGACCCCGGAAATCTCATCCATGCTGTCTGGTGAATCTCAGTATCTGCAAGATTCCAACCAGAACAACTATAACAACAACAACATGCAATACTCGAACTCTGAGAATGTTGTACCTGCTGAAAATGGTTCCGGAAAGAGTCTGTCGGATGAACTGGCTGACATAGAATCGGAGCTGAAGTTCTTTCAGACAACTTATCTTGATGGAAGCTGGGATGATGCTTCACTGGGAAGCCTGCTGAGTGCAGAGACAACACAGGATGCTGCAAACCCAATGAGCCTGTGGAGCTTTGATGACCTTCCTCCATCCATGATGGGTGGACTACAAGAATCTGTGGTTGGAGATGGTGTGAGAACGAAAGTAAAAGGGCTTAAGCTTAAGCATGTGTGGAGGTTATTCACTGGTAGCTAA 1293 0.488 MCGGAIISDFIPAAAAAAAGTGRRSRRLTADYLWPDLNKLGAGRRFSKPLKPETVIDMDDDFEADFREFKDDSDIDVDEDDDELMIDVKPFASSATKSSKRPVSRGSAAAKTEKSDVQAEKSLKRTRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEVSGNSSKRIKTSKVEKPLPKANLTQNFNAGTNLEDYYYSMGLMEQKPQINNQFAAPATANMGSFPETNNVVPSIASSDDVTVYFSSDQASNSFDYSDFGFGEQAPKTPEISSMLSGESQYLQDSNQNNYNNNNMQYSNSENVVPAENGSGKSLSDELADIESELKFFQTTYLDGSWDDASLGSLLSAETTQDAANPMSLWSFDDLPPSMMGGLQESVVGDGVRTKVKGLKLKHVWRLFTGS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1076 430 ProSiteProfiles AP2/ERF domain profile. 130 187 IPR001471 GO:0003700|GO:0006355
Lele41g1076 430 SMART rav1_2 130 193 IPR001471 GO:0003700|GO:0006355
Lele41g1076 430 MobiDBLite consensus disorder prediction 297 314 - -
Lele41g1076 430 Pfam AP2 domain 130 179 IPR001471 GO:0003700|GO:0006355
Lele41g1076 430 CDD AP2 130 188 IPR001471 GO:0003700|GO:0006355
Lele41g1076 430 MobiDBLite consensus disorder prediction 95 131 - -
Lele41g1076 430 PANTHER DNA-BINDING DOMAIN 100 320 IPR044808 GO:0003700|GO:0009873
Lele41g1076 430 SUPERFAMILY DNA-binding domain 130 189 IPR016177 GO:0003677
Lele41g1076 430 FunFam Ethylene-responsive transcription factor 2 129 188 - -
Lele41g1076 430 MobiDBLite consensus disorder prediction 295 314 - -
Lele41g1076 430 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Lele41g1076 430 PRINTS Ethylene responsive element binding protein signature 153 169 IPR001471 GO:0003700|GO:0006355
Lele41g1076 430 PRINTS Ethylene responsive element binding protein signature 131 142 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1076 Lele-ChrLele41 19948861 19951211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1076 1 402 AP2-EREBP Transcription Factor Family AT1G53910 45.913 2.00e-71 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele41g1076 AP2 2.3e-12 CL0081