Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele41g1064 | ATGGCGAATGGAGAGGAGAAAGGCAATGACTTCTATGCGGTTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTAAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCAGCGTCGGGGAATTCAAAGTTCGTGGAAGACGCTAGTAAGAAATTCCAGGCAATTCAGCAAGCCTATTCTGTTTTATCTGATGCGAATAAGAGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGACGACGACAATGGGATGGGAGAGTTCTTGAACGAAATGGTAACAATGATGAGCCAAACAAAACCAAATGAAAATGGGGCAGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGATATGTTTCAGGGTGACATTGGATGTTCTGGAAATGACTTCCACACTGTTGCTTCTTGTTCTACATCATCTACATACGTAACCTTCTCCGAAAGTTCGAGTTCTAACAAACGCAATTCCTTGGAGATGAATGTCGGCAACAATGCCGACTCTCCTGACTTTGAAACCACCTTCCAGAACTTCTGTTTAGGGGTGGATCGGCTACAAGACATAAAGAGGGGAGGAGGAGGAGGAGTACGAGGAACAGGTAGCAGTACCAGAAGACATGGCAGGAAGCAGAAGGTAGCATCGGGGCATGATGTTTCCTCCAATGATTTCTCCAGCATTTCTGCATGGTCACCACCTCGTTGA | 720 | 0.4514 | MANGEEKGNDFYAVMGLDKECTESELRNAYKKLAMKWHPDRCSASGNSKFVEDASKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDNGMGEFLNEMVTMMSQTKPNENGAESFEELQQLFEDMFQGDIGCSGNDFHTVASCSTSSTYVTFSESSSSNKRNSLEMNVGNNADSPDFETTFQNFCLGVDRLQDIKRGGGGGVRGTGSSTRRHGRKQKVASGHDVSSNDFSSISAWSPPR | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele41g1064 | 239 | Pfam | DnaJ domain | 10 | 78 | IPR001623 | - | |
| Lele41g1064 | 239 | SMART | dnaj_3 | 9 | 73 | IPR001623 | - | |
| Lele41g1064 | 239 | MobiDBLite | consensus disorder prediction | 153 | 174 | - | - | |
| Lele41g1064 | 239 | PRINTS | DnaJ domain signature | 12 | 30 | IPR001623 | - | |
| Lele41g1064 | 239 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
| Lele41g1064 | 239 | PRINTS | DnaJ domain signature | 30 | 45 | IPR001623 | - | |
| Lele41g1064 | 239 | SUPERFAMILY | Chaperone J-domain | 8 | 80 | IPR036869 | - | |
| Lele41g1064 | 239 | MobiDBLite | consensus disorder prediction | 195 | 239 | - | - | |
| Lele41g1064 | 239 | CDD | DnaJ | 10 | 70 | IPR001623 | - | |
| Lele41g1064 | 239 | ProSiteProfiles | dnaJ domain profile. | 10 | 81 | IPR001623 | - | |
| Lele41g1064 | 239 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 2 | 178 | - | - | |
| Lele41g1064 | 239 | MobiDBLite | consensus disorder prediction | 220 | 239 | - | - | |
| Lele41g1064 | 239 | Gene3D | DnaJ domain | 7 | 136 | IPR036869 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele41g1064 | Lele-ChrLele41 | 19867270 | 19871177 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele41g1064 | 12 | 78 | C2H2 Transcription Factor Family | AT1G74250 | 41.176 | 5.75e-10 | 57.0 |