Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1055 ATGTCGAAATTCCCTGACCCGGCGGCGGATGGCCGGAGAGTCGGCAAGGCGCCGGAGAGGTCCAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGCGAGGGTCTGGATCTTTAAGCCTTGGGATGGCTGGGAAAATGGAATCTAGAGCAGTTACGAAGGACTCGAAGACAAACCTGGAAAATCCTGATGATACATTGAGACTTAATGCTTCTGCTATGGAATGTCTTCCTCAGTTCGTGGAAAACGCCTGCATCAAGAAGTCTGATTCGAGATCAGACCCTGAACCCCAAATGACGATATTTTATGCCGGAAAAGTGTTAGTGTTTAATGCTTTTGCTCCTGAGAAGGCCACAGAGATCATGGAGCTAGCCACCAAATTAAGCTCTGATAGTACTGTTTCTGATATTAGCAAGAACCTCCCAAGTGCTTCTACTGCTAAAGAAAATCAGGATGTGGCCAAAGTTCCTCAAAACAACACTGCTCAGGATCAGGCAGTTCCAAAATCAGAACCTCCACCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAATTCCTTGAGAAGAGGAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAACGGTCCACATAATCCAAAGCCGGATGAAAGCAGTTCAGGAGACCCTGAGCAAGGCCAATCTTCCAAATCATTTGACCTTAACATATAG 720 0.4556 MSKFPDPAADGRRVGKAPERSNFTQYCNVLSQLLKEKRGSGSLSLGMAGKMESRAVTKDSKTNLENPDDTLRLNASAMECLPQFVENACIKKSDSRSDPEPQMTIFYAGKVLVFNAFAPEKATEIMELATKLSSDSTVSDISKNLPSASTAKENQDVAKVPQNNTAQDQAVPKSEPPPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLNGPHNPKPDESSSGDPEQGQSSKSFDLNI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1055 239 MobiDBLite consensus disorder prediction 203 239 - -
Lele41g1055 239 Pfam Jas motif 187 209 IPR018467 -
Lele41g1055 239 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 222 IPR040390 -
Lele41g1055 239 SMART tify_2 96 131 IPR010399 -
Lele41g1055 239 MobiDBLite consensus disorder prediction 215 239 - -
Lele41g1055 239 Pfam tify domain 101 129 IPR010399 -
Lele41g1055 239 MobiDBLite consensus disorder prediction 133 187 - -
Lele41g1055 239 MobiDBLite consensus disorder prediction 133 171 - -
Lele41g1055 239 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1055 Lele-ChrLele41 19789814 19792397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1055 12 225 Tify Gene Family AT1G19180 35.102 1.08e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele41g1055 tify 4e-14 No_clan