Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1027 ATGGAACCAAACCCAGCATCAGATCACATTCTGGATTGGTTTGAAGGTTCTGTTTCTTACTATCCATCTTTATTGGATGATCCATATAACCCGGGTGGTATTCAAGATTATAACTTGTGGGGCCAGGGACAAGACATAGGCCAAGGATACCAGGTTGTTGTTGGCCCTGGATCTCCCAATGCCGGCACCGGCACAACCTTGTCTGCCGCCACACCCGCCGAGCCTTATATTTATAGTAACCCACCATCTTCTGATCTGTCAAAGAAAAGAAACGCTTCTGATGATTTGTGTATCAAACCATCTTCTCAGAATCACAAGTCTAAGAAAATTAAGAGACGTGCAGCAGCCAATGAAGCTGACAATGGAGGTGCAGTTGTAGAAGGGACAATAACGGTTAAGAAATCTGCGGGGAGCAAGAAGGGATCTGCTAAGGCCAACGGGAATAACTGTAATAACGGTAACAACAAAGAAGGGAGGTGGGCTGAGCAGCTGCTGAACCCTTGTGCTCTAGCCTTGGCTACAGGGAATCTGACTCGTGTGCAGCACCTCTTGTATGTTCTCCATGAGCTCGCCTCGCTGTCTGGCGATGCCAACCACCGGCTCGCCGCTCATGGCCTCCGAGCACTGACACAGCATTTATCTTCTTCTTCTTCTTCTTCCTTTTCTTCCACCACTGCAACTTCAGGGCATGTTATTTTTGCTTCTGCAGACCCAAGGTTTTTTCAAAGATCTCTGCTCAAGTTCTATGAGGTTAGCCCCTGGTTTGCATTTCCTAATAACATAGCGAATTCTTCCATTATGCAAATTCTTGCTGAAGAATCCAATAGTTCAAAAACACTACACATCATTGACATCGGTGTCTCTCATGGTTTTCAATGGCCAACATTCTTAGAGGCCTTGACTCGCCGGCCCGGCGGACCGCCTCCACTGGTTCGCCTCACCGTGGTGACTGCACCGGTAGAAAATGACCAAAATATGGAGACCCCATTTGCTATTGGCCCACCTGGTGACAACTTCTCTTCTAGACTCCTTGGTTTTGCCAAGTCTATGAACATCAATTTGCAGATAAACAGGCTTGATAATCATCCATTACAGAATCTAAATGCTCAAATTCTCAATGTCTCACCAGATGAAACATTTATTGTATGTGCACAATTTAGGCTGCACCACCTGAATCATAACACTTCTACTGATGAACGGAGTGAGTTTCTGAAGGTTCTGTGGAGAATGAAGCCCAATGGGGTGATACTAAGCGAGAACAACATGGAATGTTGCTGCCACAGTTGTGGGAATTTCGCCTCTGGATTTGAGCGAAGAGTGGAGTTCTTATGGAAGTTTTTGGATTCCATAAGCTCAGCATTCAAGGGCCGAGAAAGCGAGGAGAGGAGACTGATGGAAGGGGAGGCTGCAAAAGCATTGACAAACCAGCGTGAGATGAATGAAGGGAAGGAGAAATGGTGTGATAGAATGAGGGAGGCAGGGTTCGCAGGGGAGAAATTCGGCGAGGACGCCATCGATGGAGCTCGAGCTCTGTTGAGGAAATATGATAATAATTGGGAGATGAAAATAGAAGAGAACCATACCAGTGTAGGACTATGGTGGAAGGGACAACCTGTTTCTTTCTGTACCTTGTGGAAGCTAAACAAGAACGATAATGGCGGTTCAGCTTCGTCATTGACGAGTCAGCTTTAG 1692 0.4639 MEPNPASDHILDWFEGSVSYYPSLLDDPYNPGGIQDYNLWGQGQDIGQGYQVVVGPGSPNAGTGTTLSAATPAEPYIYSNPPSSDLSKKRNASDDLCIKPSSQNHKSKKIKRRAAANEADNGGAVVEGTITVKKSAGSKKGSAKANGNNCNNGNNKEGRWAEQLLNPCALALATGNLTRVQHLLYVLHELASLSGDANHRLAAHGLRALTQHLSSSSSSSFSSTTATSGHVIFASADPRFFQRSLLKFYEVSPWFAFPNNIANSSIMQILAEESNSSKTLHIIDIGVSHGFQWPTFLEALTRRPGGPPPLVRLTVVTAPVENDQNMETPFAIGPPGDNFSSRLLGFAKSMNINLQINRLDNHPLQNLNAQILNVSPDETFIVCAQFRLHHLNHNTSTDERSEFLKVLWRMKPNGVILSENNMECCCHSCGNFASGFERRVEFLWKFLDSISSAFKGRESEERRLMEGEAAKALTNQREMNEGKEKWCDRMREAGFAGEKFGEDAIDGARALLRKYDNNWEMKIEENHTSVGLWWKGQPVSFCTLWKLNKNDNGGSASSLTSQL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1027 563 MobiDBLite consensus disorder prediction 63 116 - -
Lele41g1027 563 Pfam GRAS domain family 162 546 IPR005202 -
Lele41g1027 563 ProSiteProfiles GRAS family profile. 152 546 IPR005202 -
Lele41g1027 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 148 534 IPR005202 -
Lele41g1027 563 MobiDBLite consensus disorder prediction 63 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1027 Lele-ChrLele41 19582327 19584018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1027 3 546 GRAS Transcription Factor Family AT3G13840 51.642 5.10e-171 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele41g1027 GRAS 1.3e-77 CL0063