Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1025 ATGATGAATACTGCTACTACTGCAAGAAATAGGCCTCCTTTCACAGCTTCTCAGTGGCAAGAACTTGAACAACAAGCTCTTGTTTTCAAATATATGGTCTCAGGAACACCGATTCCACCTGATCTCATTTACTCCATCAAAAGAAGCCTTGACTCTTCAATATCTTCAAGGCTTTTCACTCACCATCCTGGTGTGGGATGGGGATGTTTTGAGATGGGTTTTGGGAGAAAAATTGACCCAGAACCAGGAAGATGCAGAAGAACAGACGGAAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCAAAATACTGTGAAAAACACATGCACAGAGGAAGAAACCGTTCAAGAAAGCCTGTGGAAGTTCCTTCATCAACAAGCAGCATTTCAACAAACACCTCGCAATCAATCTCACCGTATAGCTTTAACAGAGGTCTTTCAATGATGAGCAGCAATCCAAATAACAACAACAACAACACAGCTTCACTCTCTTCTTCTTTCCCTTTCCCTGAATCATCATCTCAATATCCTTACCAAAGTTCTTCTCTTAATCCCTTCTTTTACAACACCCATTCATCAACCTCTTCGAGACCTCCTGATTCTGATTTCTCATCTCATGGCAACACTACCCATCAGCTATTTTTGGACTCTGGATCTTATTCTCAGGACGAGAAAGACTATAGAAATATTCATGTGGACGAAAGGGCATTTTTCCCAGAAGCTTCAGAGTCAACTAGAAGCTTCCCTGACTCATACCATCACCAATTATCTATGAACTCCTATAATAAATCCTATTCAAACTCTCACCAGTTTCAAGGCCTAAATGGTAATGAGAGTAATCCAAGGCAACAACAACAAGAAGAGCAACATTGTCTTGTTCTAGGCACTGACTTCAAATCACCAAGACCGAGCAAAAGTACTGAGGAAGAGACTAGTACTGAAACTACCCACAGACCACTTCACCACTTCTTTGGGGATCAGTGGACTCAAAAGAACACAGATTCTTGGCTTGATCTTGCTTCCAACTCCAGAATTTCCACGGGTAATCGTCGTCATTAA 1062 0.4134 MMNTATTARNRPPFTASQWQELEQQALVFKYMVSGTPIPPDLIYSIKRSLDSSISSRLFTHHPGVGWGCFEMGFGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGRNRSRKPVEVPSSTSSISTNTSQSISPYSFNRGLSMMSSNPNNNNNNTASLSSSFPFPESSSQYPYQSSSLNPFFYNTHSSTSSRPPDSDFSSHGNTTHQLFLDSGSYSQDEKDYRNIHVDERAFFPEASESTRSFPDSYHHQLSMNSYNKSYSNSHQFQGLNGNESNPRQQQQEEQHCLVLGTDFKSPRPSKSTEEETSTETTHRPLHHFFGDQWTQKNTDSWLDLASNSRISTGNRRH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1025 353 PANTHER GROWTH-REGULATING FACTOR 5 12 336 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele41g1025 353 MobiDBLite consensus disorder prediction 106 177 - -
Lele41g1025 353 Pfam QLQ 13 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele41g1025 353 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele41g1025 353 MobiDBLite consensus disorder prediction 262 326 - -
Lele41g1025 353 MobiDBLite consensus disorder prediction 303 322 - -
Lele41g1025 353 MobiDBLite consensus disorder prediction 120 177 - -
Lele41g1025 353 Pfam WRC 80 122 IPR014977 -
Lele41g1025 353 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele41g1025 353 MobiDBLite consensus disorder prediction 190 211 - -
Lele41g1025 353 ProSiteProfiles WRC domain profile. 79 123 IPR014977 -
Lele41g1025 353 MobiDBLite consensus disorder prediction 262 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1025 Lele-ChrLele41 19569226 19570502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1025 11 331 GRF Transcription Factor Family AT3G13960 39.247 4.37e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele41g1025 WRC 2.4e-21 No_clan