Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1021 ATGCTCAAAGCGGAGAGTGCTAGATCTATGAAATTCAAGGACAAGTACACGATACATGTTGAAAACCACCAAAATCATGGTCTTGGTGAGCAGCTACTTGGTGGACTCGTTTATCAGTCACTCTCTCCGCCTTTATGTTTGTATACTGGAGGTGCATGTGAATTTTCCATGGAGATGTTGGTTGGAATTGAGGATAATGACGAGGGGAAGCTTGAAGACAGTGGGGTTGATAGGAATAGCTGTGATTTGTCTTCACCGAAGCAGATTGCCAATCCAGTTGTGTACAAGCTCGTGCGGGTTGAAGGTGATGGGAGTTTAGTTCCTGCAACAGATGATGAATTAATTGAGGTGGAGGATTTCCTTGAGTACGACCAGATTGAAATGGGTGATGATGTGGACATTGGACTCCATGAAGGATGTTCATCAATTGAAAGGTCTTCCTCTGAGAAGCTTCAATTGGAGTGCTCAGAAGATACTGCAGAGGCAGATCCAGGGAAATTAAATGCACGGCTTCAGCATATTGAGCAGATGTTGCAAAAGGTCAAGCACGAAGAGAAGCTTCATTTGGCCTGTGGATCACCTGGTCTTTCTTATGTAAATGTAGACAGACAGTATTCTGCTGCTGATTTGCCTGTCATGGATGGGATAATTCACTGTGATACTTCCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAGATAACAGTCATAGTAATCAATCACAAAGTATTGGTGGGTGTTCTAGACCTTCTGAAGGACAGATAGAAAGTGGATCATCTACCTCTGCTGTCTATTCTACTTTGAAGCCTGATTTTTCGATGATAAAAGGAGAAATATCCTTGGACAGGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGCTGAAGAGAAGGATTGCCATGAGTTTAACTAACTCATGTGATGTTTCAGCAACAACTTTCATAGTTAGAGACAACATATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGATGCTGTGCTCTTCAAGGATACTATGGCTGGGAAAGAGGATATCAACTGTAAGGATTCATCATGTGCTAAGGCTACTGGAAATGATGATAATCAAGTTGTTTCTGGAAAGAGACTGAGAAGTCATAAAGTGGAACATGATTTGTGTAGTGAGAGTCTCCAGACAGAACAAAGAGCTGCCAAAAGAATCCGTAAGCCCACTAGGAGATATATTGAAGAGCTCTCTGAAAATGAGTCCAGGGACCACAATCCTAGGTTGTTAAGTTCAAACAGAAGTATGGAACTTGGACATGTCTCTCCAAACTCATACAATGGGCCTGCTAGGAATGTTTTTTCAGAGGGAAGAACTTTTGTAACTAGGTTTGACTCTCTGGGAGGTTCTGAAATTTACATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCTCTTATGAAATTCCATCAAAGCGGTGACATGGTGAAGGTTGTCAACTTTAGCAATAAGGCCCTGGGAGATCATGGATGTCAGGAAGATGAGGGATGGGATTTAAAATCAAGATCCACACCTGCAAAATTTCAGCAGCGATTTACTGTTGAGCAGAAAGATGAACTGTCCCCAGTAATGGACAGAATTGAGCCACGACAGGAATCAAGACTGAGAATGGCAGATCTATCTAGCTATAGTTTAGATGACAACATAGCGACAGTCCCCACTCCAAAAGGCGGAATGAGAAGGAAACATCATAGGGCATGGACCCTTGTTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGATGGTCTGAGATCAAACGGCTTTCCTTTGCTTCCTACTCATACCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAACTTGCTTAAAGCTAGCTTTGCACAGGCAGCTTCAGATGAGGGTATGAACTCACGGAAGCATGGTACAGTACCCATTCCCGAGCCAATTTTGGTACGAGTACGAGAGCTCGCCGGGATGAATTCTCAGGTACCTATAAGCTTCAGCTCAAGCAAACTAACAGCCTGCACTGTGTTTGATCATGATGATAGATCAGGGTACTTGTAG 2133 0.4276 MLKAESARSMKFKDKYTIHVENHQNHGLGEQLLGGLVYQSLSPPLCLYTGGACEFSMEMLVGIEDNDEGKLEDSGVDRNSCDLSSPKQIANPVVYKLVRVEGDGSLVPATDDELIEVEDFLEYDQIEMGDDVDIGLHEGCSSIERSSSEKLQLECSEDTAEADPGKLNARLQHIEQMLQKVKHEEKLHLACGSPGLSYVNVDRQYSAADLPVMDGIIHCDTSFQEIIPSSAPSLDNSHSNQSQSIGGCSRPSEGQIESGSSTSAVYSTLKPDFSMIKGEISLDRLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIVRDNILVKKCEEGSDGNVDAVLFKDTMAGKEDINCKDSSCAKATGNDDNQVVSGKRLRSHKVEHDLCSESLQTEQRAAKRIRKPTRRYIEELSENESRDHNPRLLSSNRSMELGHVSPNSYNGPARNVFSEGRTFVTRFDSLGGSEIYIPCVSRIRRCRPRKNIMPLMKFHQSGDMVKVVNFSNKALGDHGCQEDEGWDLKSRSTPAKFQQRFTVEQKDELSPVMDRIEPRQESRLRMADLSSYSLDDNIATVPTPKGGMRRKHHRAWTLVEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASFAQAASDEGMNSRKHGTVPIPEPILVRVRELAGMNSQVPISFSSSKLTACTVFDHDDRSGYL 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1021 710 CDD SANT_TRF 596 646 - -
Lele41g1021 710 MobiDBLite consensus disorder prediction 436 451 - -
Lele41g1021 710 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 82 692 - -
Lele41g1021 710 MobiDBLite consensus disorder prediction 420 451 - -
Lele41g1021 710 MobiDBLite consensus disorder prediction 420 435 - -
Lele41g1021 710 SMART sant 594 647 IPR001005 -
Lele41g1021 710 Pfam Myb-like DNA-binding domain 597 645 IPR001005 -
Lele41g1021 710 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 590 649 IPR017930 -
Lele41g1021 710 Gene3D - 587 692 - -
Lele41g1021 710 MobiDBLite consensus disorder prediction 230 261 - -
Lele41g1021 710 ProSiteProfiles Myb-like domain profile. 598 645 IPR001005 -
Lele41g1021 710 SUPERFAMILY Homeodomain-like 592 651 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1021 Lele-ChrLele41 19510869 19519671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1021 598 656 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 8.54e-06 46.6