LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele41g1013	ATGAATTTGAGAGCGGCCGAGGAAGAATCGGGTCAAGAGATTCATCTTCCGGTCGATATAGATTGGCAAATGCTTGATAAATCGAAGTTTTTCTTTCTTGGCGCTGCTCTTTTCTCAGGGGTATCAGCGACTCTCTACCCTGTTGTAGTGTTGAAAACCAGGCAGCAGGTAGCTCACTCCCAAGTTTCATGCCTCAAAACCGCAATTTCACTGGTTAGGCTTGAGGGCTTCAGAGCATTGTACAGAGGATTTGGGACTTCCTTGATGGGTACAATCCCAGCTCGAGCACTGTACATGGCTGCCTTGGAGGTCACCAAGAGTAATGTAGGTACTGCTACAGTTAGGCTAGGACTTGCAGAACCAACTGCAGCTGCAATTGCCAATGCAGCTGGAGGTTTGAGCGCAGCCATGGCAGCTCAACTTGTGTGGACACCTATTGATGTTGTGAGCCAGAGATTGATGGTTCAAGGTGGGTGTAATAACCCTAACAATCATATGGCTAATTCAGCACGCAATTACATCAATGGCATTGATGCCTTCAGAAAAATCCTTAACACTGATGGTCCCAGAGGCTTGTATAGAGGGTTTGGGATATCCATTTTGACTTATGCTCCTTCAAATGCAGTTTGGTGGGCTTCTTACTCTGTTGCACAAAGGCTGATCTGGGGTGGAGTTGGGTACTACCTTTGCAAGAAAGATAATGATGAAAGCAACAATACTACAACAGCAAACACATTGAGACCAGATTCAAAAACAGTAATGGCAGTTCAGGGAGTTAGTGCTGCAATTGCTGGTGGGATGTCTGCTTTAATTACCATGCCTTTGGATACAATCAAAACAAGACTACAGGTCTTGTATGGTGATGAAAATGGCCGCCGAGGGCCAACAGCTATGCAGACAGTGAGGAACTTGGTTAAGGAAGGTGGTTGGGCAGCTTGTTACAGAGGGTTGGGACCTCGGTGGGTTTCCATGTCAATGTCTGCAACGACAATGATCACTACCTACGAGTTTCTGAAACGGCTTTCCACCAAAACCCCGGAGGTCATGTTATATGTATATCTTGAAAATAATATGTTTCTTGTAGATTTTGAAGTTTGA	1098	0.4526	MNLRAAEEESGQEIHLPVDIDWQMLDKSKFFFLGAALFSGVSATLYPVVVLKTRQQVAHSQVSCLKTAISLVRLEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVRLGLAEPTAAAIANAAGGLSAAMAAQLVWTPIDVVSQRLMVQGGCNNPNNHMANSARNYINGIDAFRKILNTDGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLIWGGVGYYLCKKDNDESNNTTTANTLRPDSKTVMAVQGVSAAIAGGMSALITMPLDTIKTRLQVLYGDENGRRGPTAMQTVRNLVKEGGWAACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKTPEVMLYVYLENNMFLVDFEV	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele41g1013	365	Pfam	Mitochondrial carrier protein	126	221	IPR018108	-
	Lele41g1013	365	Pfam	Mitochondrial carrier protein	255	344	IPR018108	-
	Lele41g1013	365	Pfam	Mitochondrial carrier protein	37	108	IPR018108	-
	Lele41g1013	365	PRINTS	Mitochondrial carrier protein signature	83	103	IPR002067	GO:0055085
	Lele41g1013	365	PRINTS	Mitochondrial carrier protein signature	31	44	IPR002067	GO:0055085
	Lele41g1013	365	PRINTS	Mitochondrial carrier protein signature	193	211	IPR002067	GO:0055085
	Lele41g1013	365	PRINTS	Mitochondrial carrier protein signature	261	283	IPR002067	GO:0055085
	Lele41g1013	365	PANTHER	MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J	9	345	-	-
	Lele41g1013	365	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	26	108	IPR018108	-
	Lele41g1013	365	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	123	220	IPR018108	-
	Lele41g1013	365	SUPERFAMILY	Mitochondrial carrier	23	338	IPR023395	-
	Lele41g1013	365	Gene3D	Mitochondrial carrier domain	30	349	IPR023395	-
	Lele41g1013	365	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	252	341	IPR018108	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele41g1013	Lele-ChrLele41	19447699	19448956	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele41g1013	1	347	Chloroplast and Mitochondria Gene Families	AT1G72820	76.068	0.0	532