Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1010 ATGGATCTCTCACTAAAGTCAGAGGACGTCGGAGCAACAGCGATCGCCATTGATAAGGATAAGAACTGCCAACATGCAGTCAAATGGGCCGGGGATCATCTCGGAAAGAACTCATGCATCCTTATCCATGTCCGTACCAAGGGATTTCATCCCCGTAGGTATTCTTCTCTGTCATCCCCATCATCACTATCATTATCATCAATATTACCTATTGAACCTTCGAGAAAATCCGCAAGCTTTAGTAAGATGCCAGTATCATGGGTTGGTGTTTGTAATATTGTCGGTCTACAATGTGAAGAACCCTTTAGATTTGATAATGTTGATGTTGCCCATAAAGAAGGCGTCCCTCCATCGGGAGAAGAAATGCATCAACTTTTTCTTCCCTATCCAGGATTTTGTGCTCGAAAAGGGATAGAAGCAAAGGAGTTGGTTCTGCAAGACCTTGATGTCCCAAGCGCCCTTACTTTTTATATCATTAACAACTCTATCAGAAACGTTGTTATTGGTGCTTCTCACCGTAATATTCTTACGAGGAAATTTAAAGATGCAGATGTCCCAACTTGCTTAGTCAAGTCTTTGCCTGAGTCCTGCACAATATACGTTATATCAAAAGGAAAAGTACAAAATATCAAACCAACATGTCAAAATAAAAATCATTCCATCAAGTCAACTAAATCTATAAAAGACAATAACCAAGGAAGTTCTCGGGCTGATGATTCACCTAGGCTTCCTAGTGTCCCAGATTCTGAAGAAGAAAGCAGAGATTCAGCCCGCCGTGGAAGTGGACAAGGCTCAAGCGTTGATGGAGTATCTAATAGTAAAAATCATACCTCTACACAAAATGTACAGCATGAACCAAATGGAGAAGCTGATTCCCCAGTATCGAATCAAAATCCATATTCCTTCATTAGTGATATGTCAGGGCCGAGTAGTTTTCAATCAAATGATAAGTCCCACGAAAACCAAGAAGTATCCGAGAACTCAGACAGTTGCATCAGCCTATCTTCAAAAATCCCAAAAGACTTGGAGAGCGAAATAAGGAGATTAAAACTGGAAGTGAAAAAAACAATGGAGAAGTATAGCTTAGCTTGCAAAGAAGCTATTGAAGCAAAAATGAAGGTAATGGAGCTTGAACAGATTAGGGAAGAAGAAGGACTCAACCTAGAAAGAGCTAGGCTCGCTGAAGAGGCTGCATTGACTTTGACAGAGGCAGAAAGAGTGGCAACAAACTACTTTGACAATTCAAAGAAAATTGGTGAAGGTGGATATGGACCTTTTTCCAGAGGGATGCTCGATCACACTGTTGTTGCCATCAAGATATTTCAGAAGCAATTTTTTTCAAGAGGTGTAACATTTGCACAAGTTGAAGTTTTGAGCACCATAAGACATCCTAACATGGTTATCCTCCTAGGTGCCTGCCTAGAGTATGGATGCCTTTTGTACGAATATTTGGAAAATGGCAGCTTAGAAGACCGTCTCTGCCAGAAAGATAACACTCCACCAATTCCATGGAAACTTCGATTCAAGATTGCAGCAGAAATTGCCACCGGCCTTCACTTCCTTCACCAAACAAGGCCTGAACCACTGGTGCATCGAGATCTCAAGCCTGCAAATATACTCTTCTTGGACAAGAACTACAAGAGCAAGATCAGTGATGTGGGTTTGGTCAGGCTTGTTCCTCCATCTGTAGCTGATAAAACCACTCAATATCGCATGACAGCCGCAGCAGGAACATTCTGCTATATTGACCCAGAGTATCAACAAACAGGAATGTTGGGTGTAAAATCAGACATATATTCCTTAGGTGTAATGCTGCCTCAGATTCTTACAGCAAAGCCTCCTATGGGTTTGTCTCACCTGGTTGAAAAGGCTATCCAAACGGGCAAATTTCCAGAGGTGCTTGATCCAAATGGGACAAATTGGCCTGTTGAAGAGGCTTTATCACTTGCTATGTTGGCTTTGAAATGTTATGAATTGAGGAAACGAGACAGACCAAATCTTGGCTCAGTCATTTTGCCGGAGCTAGATCGGCTCAAAGATTTAGAAGAAGACAGATATGTGAAAGAAGACACTGACAGCAATAACAGATTTGAGAAACGGAATCAAGAGGCAATGAGTAGCAATAGCAATCATAATGTGGAAATCGAGAGAAGGCAGAGGAAACCCATGAAGTCTCTGAGCAACAAAAGCAGTAGCAGTAGCAGAAGCAGAGTAGGAGAAGGAGGCCACTTTCCAGCATCAAGAAAACATGTTGAGGAAGTTACAAACAAGCAATATAGTGATGAGAGAGGAAGCTGCTGGTCTTTTTGA 2310 0.4173 MDLSLKSEDVGATAIAIDKDKNCQHAVKWAGDHLGKNSCILIHVRTKGFHPRRYSSLSSPSSLSLSSILPIEPSRKSASFSKMPVSWVGVCNIVGLQCEEPFRFDNVDVAHKEGVPPSGEEMHQLFLPYPGFCARKGIEAKELVLQDLDVPSALTFYIINNSIRNVVIGASHRNILTRKFKDADVPTCLVKSLPESCTIYVISKGKVQNIKPTCQNKNHSIKSTKSIKDNNQGSSRADDSPRLPSVPDSEEESRDSARRGSGQGSSVDGVSNSKNHTSTQNVQHEPNGEADSPVSNQNPYSFISDMSGPSSFQSNDKSHENQEVSENSDSCISLSSKIPKDLESEIRRLKLEVKKTMEKYSLACKEAIEAKMKVMELEQIREEEGLNLERARLAEEAALTLTEAERVATNYFDNSKKIGEGGYGPFSRGMLDHTVVAIKIFQKQFFSRGVTFAQVEVLSTIRHPNMVILLGACLEYGCLLYEYLENGSLEDRLCQKDNTPPIPWKLRFKIAAEIATGLHFLHQTRPEPLVHRDLKPANILFLDKNYKSKISDVGLVRLVPPSVADKTTQYRMTAAAGTFCYIDPEYQQTGMLGVKSDIYSLGVMLPQILTAKPPMGLSHLVEKAIQTGKFPEVLDPNGTNWPVEEALSLAMLALKCYELRKRDRPNLGSVILPELDRLKDLEEDRYVKEDTDSNNRFEKRNQEAMSSNSNHNVEIERRQRKPMKSLSNKSSSSSRSRVGEGGHFPASRKHVEEVTNKQYSDERGSCWSF 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1010 769 MobiDBLite consensus disorder prediction 213 239 - -
Lele41g1010 769 MobiDBLite consensus disorder prediction 243 258 - -
Lele41g1010 769 Gene3D Transferase(Phosphotransferase) domain 1 395 715 - -
Lele41g1010 769 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Lele41g1010 769 Pfam Protein kinase domain 413 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1010 769 MobiDBLite consensus disorder prediction 213 332 - -
Lele41g1010 769 ProSiteProfiles Protein kinase domain profile. 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1010 769 SUPERFAMILY Protein kinase-like (PK-like) 404 670 IPR011009 -
Lele41g1010 769 PANTHER OS02G0152300 PROTEIN 408 730 - -
Lele41g1010 769 MobiDBLite consensus disorder prediction 742 759 - -
Lele41g1010 769 SMART serkin_6 412 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g1010 769 MobiDBLite consensus disorder prediction 259 318 - -
Lele41g1010 769 MobiDBLite consensus disorder prediction 686 769 - -
Lele41g1010 769 CDD STK_N 13 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1010 Lele-ChrLele41 19432785 19437757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1010 5 692 Receptor kinase-like Gene Family AT1G17540 41.207 6.01e-165 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele41g1010 Pkinase 5.6e-34 CL0016