Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g1009 ATGGCGTACCAGACCCCCGATCGTGACTCAGAATCGGGATTGCAAAATCAAACACGCCTTTACAATCCCTACAAGGACCTCGAGGTACCTATTCGAAATCTTTACCAGCTTCCGACATCTCCTGAATACCTTTTCGTCGAAGAGGCCCGCCGCAAGCGTAGATCCTGGGGTGAGAACCTCACCTTCTACACTGGGTGTGGATACCTCTCCGGCGCCGTTGGTGGCGCTGGACTGGGACTCGTCCATGGCGTTAAATCCTTTGAATCTGGCGACACCACAAAGCTTCGGATTAACCGTGTTCTTAACGCATCTGGCCATTCTGGTAGATCTTGGGGCAACCGACTTGGAGTGATCGGGTTGATGTATGCCGGTATCGAGAGCGGGATTCAGGCCGTCAGGGATACTGATGATGTCTGGAACAGTATGGCGGCAGGGCTTAGCACGGGTGCATTGTATCGAGCTGCGAGAGGAGTGAGATCGGCTGCGGTCGCAGGAGCCGTTGGTGGAGTTGTGGCGGGAGCGGCTGTGACAGCGAAGCAGGCTTTGAAGCGCTACGTGCCAATATGA 567 0.5503 MAYQTPDRDSESGLQNQTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLSGAVGGAGLGLVHGVKSFESGDTTKLRINRVLNASGHSGRSWGNRLGVIGLMYAGIESGIQAVRDTDDVWNSMAAGLSTGALYRAARGVRSAAVAGAVGGVVAGAAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g1009 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 62 172 - -
Lele41g1009 188 PANTHER TIM23 30 177 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g1009 Lele-ChrLele41 19426959 19427525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g1009 10 188 Chloroplast and Mitochondria Gene Families AT1G72750 69.231 1.75e-79 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1168 39 20361046 20366233 Lele41g1009 41 19426959 19427525 CCT
Lele41g1009 41 19426959 19427525 Lele43g0386 43 3454899 3455465 hybridization
Lele41g1009 41 19426959 19427525 Lele44g0387 44 2825283 2825849 hybridization