Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0999 ATGGAGCCTCGAGTAGGGAACAAATTTCGTCTTGGCCGGAAGATTGGTAGCGGATCGTTTGGGGAGATCTATCTTGGTACTAATATTCAGACAAATGAAGATGTCGCAATTAAGCTCGAAAATGTCAAGACCAAACACCCTCAGCTGTTGTATGAATCGAAGCTGTATAAAATACTGCAAGGAGGAACTGGAATCCCAAATGTTAGATGGTTTGGTGTTGAAGGAGACTACAATGTGCTTGTGATGGATTTACTGGGGCCCAGTCTTGAAGATTTATTCAATTTTTGTGGTCGGAAATTGTCACTGAAAACTGTTGTAATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTGTTCATTCAAAATCGTTTTTACATCGGGACATCAAGCCAGACAACTTTCTCATGGGTTTAGGAAGGCGTGCAAACCAGGTATACATCATTGACTTTGGTCTTGCAAAGAAATACAGAGACACTTCTACCCACCAGCATATTCCTTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGTCGCAGGGATGACTTAGAGTCACTTGGATACGTTCTTATGTACTTTTTAAGGGGAAGTCTTCCTTGGCAGGGACTGAAAGCAGGTAATAAGAAGCAGAAGTATGAGAAGATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGGTATCCCTCAGAATTTGCATCATACTTCCACTACTGCCGGTCTCTGCGTTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTCCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCCCATATTGCTACTCCTCCTGGTCGTGCTATTGTTCCTGGTGCTGGACCAAGTTCTGGCATGCCACCAATTGTTGCAAATGCTGATAGACATTCAGGCGGGGAAGATGGCAGACACACTGGTTGGTCTTCATCAGAGACAGATCCTACTCGTAGGAGAAATTCAGGACCTACTGCAAATGATGTCATCTTATCTAGACAAAAAGCCCCAGTTCCAAGTGACTCAAATATATCAAAAGATGGAATGTTGTCTGGTTCTAATTTTTTCCGCCCAAGCGGATCTTCAAGGCGAGCTGCTGTCTCTAGCAGCCGGGATGCAGCTACTGTTGGCAGTGAGACTGGGCCCTCTCGCTCTCTTGCTGTTGATGCAAGTCCAGGAGCACTCCGTAAAATCGCTGGTGCTCAAAGAAGTTCACCTCTTGTATCAGCGGAGCAGATCAGAACATCATCTGGCAGGAGCCCGGCAAACATCAAGAATTTTGAGTCTACTCTAAGAGGCATTGATAGCTTGCATTTCAATGACGAAAGGGTACAATACTAG 1431 0.4305 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEDVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCGRKLSLKTVVMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSHIATPPGRAIVPGAGPSSGMPPIVANADRHSGGEDGRHTGWSSSETDPTRRRNSGPTANDVILSRQKAPVPSDSNISKDGMLSGSNFFRPSGSSRRAAVSSSRDAATVGSETGPSRSLAVDASPGALRKIAGAQRSSPLVSAEQIRTSSGRSPANIKNFESTLRGIDSLHFNDERVQY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0999 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lele41g0999 476 MobiDBLite consensus disorder prediction 366 415 - -
Lele41g0999 476 MobiDBLite consensus disorder prediction 306 418 - -
Lele41g0999 476 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0999 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lele41g0999 476 MobiDBLite consensus disorder prediction 344 359 - -
Lele41g0999 476 MobiDBLite consensus disorder prediction 328 343 - -
Lele41g0999 476 MobiDBLite consensus disorder prediction 435 451 - -
Lele41g0999 476 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Lele41g0999 476 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0999 476 FunFam Casein kinase I isoform delta-like 1 308 - -
Lele41g0999 476 Gene3D Transferase(Phosphotransferase) domain 1 1 305 - -
Lele41g0999 476 PANTHER CASEIN KINASE-RELATED 9 363 - -
Lele41g0999 476 FunFam Putative Casein kinase I 1 85 - -
Lele41g0999 476 MobiDBLite consensus disorder prediction 432 451 - -
Lele41g0999 476 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele41g0999 476 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0999 Lele-ChrLele41 19374727 19379060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0999 8 213 MAP Kinase Kinase Kinase AT3G06030 27.727 1.58e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lele41g0999 Pkinase 3e-27 CL0016