Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0988 ATGGACCTGGAGAGAGAGAGAATTAAAAGTGGATGTCAGAAGATTCTGGAAGGAATAGATTCAATATCTTTGGTAAATTTAGATGACCAGCAAGTACACTCATTGGTGATGATGAGAGAAATAGCCCGTGGGGTTGTTGATGATAGATATAGAAAGGTGACAAAGAATGACGTGATTAGTGCTTTGCGCAACAGTATCGAGAAAATGGTGTGTGCATCCAGAGATATTATTGAAGTAATAAGCAGGATGTCGTTTGAAGGCTTAGATGACCAAAGAAAGCATTTGGTATTGAGGATGAAAGAAATTGCACATGGGATTGCTGATAAACAAGCAAGAGCTGCATTAACTAGGCATGACATACTTGCAGAACAAGTTGGAGTTGGTTATGACGGGATAGGATATAGTCCAATGGATGAGTCAGCAAAGACCAGCAATGGTGATGTCCTGTTAGATGGGGGACAAAGCATAATCAATGAAAATGAGATGTTCGAGGTAGAACATGTTTTAGGATTTGAAAATGGAATAAATGAAGTACAAGATTCCCTGTTGCCATCTTCCTTTCAGCAATTTCTTCTGTGGCCTCCGGATGATTGCATCACTTTAGAGTGGGTTCAAGACATGATGTTCACCCTTGAGCAGGCTTCACAGAAGATGTTGCCATCTGAGTTCTGCCACGTCTTACCATCAATGTTGGTAGATAAATTGACAGAATCTGCTCGCAGCATACTATGCGAAGAACCAAACTGTGTGGAGATCAATTGTCAAGGAGAAGATTCAAGGGTCATTGTAGTAGGCGACATCCATGGGCAGTTTTATGATTTACTGTTTCTCTTTAAGCATATCGGCATGCCTTCTGAGAGCCAGATCTATGTTTTCAATGGAAATTATGTAGATAAAGGAGCATGGGGTATGGAGGTTTTTTTGGTCTTGTTGGCTTGGAAGGTCTTGATGCCTCACAGAGTATATCTACTCCGTGGAAATCATGAATCAAGATATTGCACCGCAAGATATGGTTTTAAGAAGGAGGTACGGACGAAATATGGTGGCCAAGGTGAAGATGTATATAATAAATGCCTAGAGTGTTTCAAGGAACTTCCATTAGCTTCAGTTATAGGTGGCTGTGTTTATACTACTCATGGAGGGCTTTTTCGTAGCATAAAAGCTGCTCCTTCGCGAAAGCCAAAGCGAAAGAAGACGCAAAGAGTGGATCTTGGATCTTTAACTGAGTTATCTGAAGTTAAAAGATCTTCTGTAGATTGCCCTTATGAAGGTCCTAACATATTATTGAGCGATATTCTTTGGTCAAAACCATCTAACAAGGATGGCCTGAGGGATAATACAGGTCGGAAATTAGGTCTATCGTGGGGTCCGGATTGCACTGAGACTTTCTTAAAACAGAACAAATTGAAGCTGATCATCAGATCACATGAAGGACCCGATGCAAGGGTTGGTCAGGATGATTTTGGGGATATGTTGTGTGGATACAGCTTGGATCATGATGGAGAATTAGGAAAATTGTATACACTTTTCAGTGCTCCTGACTACCCTCAGTTTGGTAAGAGGAGATATAACAATGAAGGAGCATATGCAATATTGAAATCGCCTGATTTTCAAAGTCCTAGCTTTCATTTATTTAAATCTGCAGATAGACCAAAGGTGGATCCTTATATTGATTATGATGCTGATGAAATGGACTTTAGCAAACTAGACTCTCCGCAAATGAATGCACAGGCCTCAACCTCTGGTATTTCAGCTTCCCAAAGATCTTATCCTGCAGGGGTGACACCGGAGTTTGACTTTGCGGCATTGGGCATTTATAATTCCCCATCTTGGAGTGTTCAGCTACCTGATGATTCAGGGGGCACCCAAGTTGTGCAGGTTCCAAGGGCTCCTGTGGTGGAAGGACTGCCTCTTCCTCAAAACATACAGGAACCTCACAGGGCCGCTTATGAGTACTTGTTTGAGCTCGTTGCTTCCTTAAAACTTATGCTTATGACAGGGGAGACTGATAACAGGTCAAGTCAGTCAGGTTTGCGAAGTAGAGCTAGGAAACAAAAAAGAGGAAGCAATAACTAA 2076 0.4162 MDLERERIKSGCQKILEGIDSISLVNLDDQQVHSLVMMREIARGVVDDRYRKVTKNDVISALRNSIEKMVCASRDIIEVISRMSFEGLDDQRKHLVLRMKEIAHGIADKQARAALTRHDILAEQVGVGYDGIGYSPMDESAKTSNGDVLLDGGQSIINENEMFEVEHVLGFENGINEVQDSLLPSSFQQFLLWPPDDCITLEWVQDMMFTLEQASQKMLPSEFCHVLPSMLVDKLTESARSILCEEPNCVEINCQGEDSRVIVVGDIHGQFYDLLFLFKHIGMPSESQIYVFNGNYVDKGAWGMEVFLVLLAWKVLMPHRVYLLRGNHESRYCTARYGFKKEVRTKYGGQGEDVYNKCLECFKELPLASVIGGCVYTTHGGLFRSIKAAPSRKPKRKKTQRVDLGSLTELSEVKRSSVDCPYEGPNILLSDILWSKPSNKDGLRDNTGRKLGLSWGPDCTETFLKQNKLKLIIRSHEGPDARVGQDDFGDMLCGYSLDHDGELGKLYTLFSAPDYPQFGKRRYNNEGAYAILKSPDFQSPSFHLFKSADRPKVDPYIDYDADEMDFSKLDSPQMNAQASTSGISASQRSYPAGVTPEFDFAALGIYNSPSWSVQLPDDSGGTQVVQVPRAPVVEGLPLPQNIQEPHRAAYEYLFELVASLKLMLMTGETDNRSSQSGLRSRARKQKRGSNN 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0988 691 Gene3D - 196 584 IPR029052 -
Lele41g0988 691 SMART pp2a_7 227 549 IPR006186 GO:0016787
Lele41g0988 691 PRINTS Serine/threonine phosphatase family signature 360 386 IPR006186 GO:0016787
Lele41g0988 691 PRINTS Serine/threonine phosphatase family signature 505 521 IPR006186 GO:0016787
Lele41g0988 691 PRINTS Serine/threonine phosphatase family signature 260 287 IPR006186 GO:0016787
Lele41g0988 691 PRINTS Serine/threonine phosphatase family signature 323 347 IPR006186 GO:0016787
Lele41g0988 691 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Lele41g0988 691 Pfam Calcineurin-like phosphoesterase 260 479 IPR004843 GO:0016787
Lele41g0988 691 SUPERFAMILY Metallo-dependent phosphatases 222 555 IPR029052 -
Lele41g0988 691 MobiDBLite consensus disorder prediction 668 691 - -
Lele41g0988 691 ProSitePatterns Serine/threonine specific protein phosphatases signature. 324 329 IPR006186 GO:0016787
Lele41g0988 691 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 34 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0988 Lele-ChrLele41 19299467 19303275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0988 191 471 Calmodulin-binding Proteins AT5G63870 53.265 2.28e-101 310