Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0987 ATGTTTCGTACGGAATCTGGTTTTTACGCGAATTCGTCTGCGGTATATCAAAGTTACGCTTGTTTCAGTTGTCTGAGAGAATGCTCTGAAGCCAGAATGAACAGAGGATCTAGTCAAAAGTCAAAGAAGTTAAGAAGAACCATGTTGGCTTCTCAAGATGATAAGGAAGCTAACATATTGGATGATTTGCCAGACGACCTTATCCATCACATTTTGTCATTCGTGGAAACCAAGGATGCAATTCGAACTTGTCTTTTATCAACAAGGTGGAGGCGATGTGATGGGACTGTATCAAATAATCATAGCTTGAGCAGTTTAGAGAGCGACATTTTGGCCCGTCGTCAAGGGAGGGAATCTAAGCCCCTGTTCATCAGAGTCTCTCTACAATCTCCTTCTTTAAGAAGTCTTGATCGGAACCAGCAAAGATTTATTATCTTCTTGGAGAATTTAATTAAGTGCTGCGATGGATGGAGACTCTCAGAGACTGATTCTGTTGATGATCGATTCTCAGCCATCGCCCACCCATTAGATACGCGTTCTGGTTTTCTTAGCCATTTGAAAAAAGAATTGCAGCGTAAGCAAATTGATGCCTTCGTGGATGATAATAAGCTTGAGAGAGGAGATATTGTTCGTGAAGAATCAATAAAAGATCCTGGAAAACGCAGTCGTTTATGGGATCCTGATGATAGTTATGAAGTATTGAAAAATAATAAGGGGACTGAAGCCATTCAAAGCATAAGTCTGGACATGTCAACAACTGGAGATTTGTCCTTAAATCCTCAAGTCTTTGCCAGGATGCACAAGTTGAAGTTTCTTAAAATATTTACTCACATATCTTCCTTGGATGCACGTGTGCATCTACCTAAAGGCCTTGAACTTTTGCCCAATGAACTAAGAATTCTTCTTTGGCAAAATTACCCTTTGAAATTCCTGCCTCCAACATTTTCTGCACAAAATCTTGTTCAACTTGTTATGAACTACAGCAATGTTGAAAAACTTTGGGATGGAGTTGTGAACATGAGAGAGTTAGATTTATCAGAGACAGCCATTGAAGAATTGCCATTATCCTTAGGATGTCTCAGCCAGCTTGAAACTTTATCTCTATGGCGTTGTCAAAGTCTCAAACATCTTCCAAACAACTTAGTTGGCCTGAGATCTCTGCGTTATCTTAAGGTAACAGGTTGCATGAAACTTCAATCTCTACCAGATCTTCCACCTTCCATTGAAATATTATGGGCCTCAGATTGTTCATCATTGGCAACAATACCAGTTTCTACTGATCCGCTCAACACAAATATGAAGGAAATTCGTCTGGCAAATTGCATGAACTTGGATGAAAGTTTGCTGAATGATATTACATGGAATATTCATCTCAAGCTGATGAATCATTATGCGTTTGAACGTGTATCCTCAGAAGAAGACCAGGAGAAGAATCAGATTGATGATGATGATGTTTATATTCGAACTGGAGGAATATACCCAGGAAGCAAAGTTCCAAACTGGTTCAAGTATAGAACATCTCAGGCTTCTTCAATAACTATTCCTCTACAATTCAATAATATTGCTCCTGAGGCCTTAATTTTCTGTGTGGTTCTTTCTCAGTTCCCATTAAGCAGTTTTCTTAACTCCATCACAGTTCACTGCTTCCTAGAAAACGATAATAATGATGGTGAGAGGCTTCATGTTAAGTCTTTGGACATTGTGTTACCTGGTACAGAACTTAATTCAGATCATGTGTGTCTGTTTTACGTAGAATGTTTGGGTGTTATGAATGGAAGGATTGAAGAAAGTACTAGAGATAGTTATGAACATAAGGTTTCGTTCGAATTTTCGGCTCAGTCAGAGGTTGAGCAAGGAGAGGAGTATAAAGAGATTGTGATAAAAGGGTGTGGGGTTTACCTGATATATGCATCACAACAAAGTTTCATAAAGGATATTGGAGAGTTGAAAACCAGAAAAGCTCCATTGTTGGAAGAAGCCAGTGAAGCTATTGATGATCTTGAAAGCTCTGGTGAGAAGAAAGATGAGGAAGAGACAGTCTCTTTAGCTGAAAAATCCAGTGGATATATATTTCCAACGCCATCACTTACAACTGGAACATGGAAGAAAGCAACTCAAGGGTTGAAAGATCTCAGGGAAGAAACAGAGAGATTTGCCCGGTTCTTTCCTTCTGTTTTTACTAAAGAACTAGGAAGAGCTTGTAATTACGTAGATAATTGGAGTTTGAGAATGTATATGGCAAGTGAGAGTCGTCTGCTTAACTTCCTGCCGCTGCTTCCTGTCGTCGATCTCACAAACCTTGTTTCAAGGGGTATAAAAGCCAAAAGTTTGAAATGTGGAATGGCAGAGTTCAGTTTGGTTCAACTGTCTTCATTTCACGCAGACTGGTTTGCTTGGCTGCTTTTCGTGGAAATTTAA 2418 0.3937 MFRTESGFYANSSAVYQSYACFSCLRECSEARMNRGSSQKSKKLRRTMLASQDDKEANILDDLPDDLIHHILSFVETKDAIRTCLLSTRWRRCDGTVSNNHSLSSLESDILARRQGRESKPLFIRVSLQSPSLRSLDRNQQRFIIFLENLIKCCDGWRLSETDSVDDRFSAIAHPLDTRSGFLSHLKKELQRKQIDAFVDDNKLERGDIVREESIKDPGKRSRLWDPDDSYEVLKNNKGTEAIQSISLDMSTTGDLSLNPQVFARMHKLKFLKIFTHISSLDARVHLPKGLELLPNELRILLWQNYPLKFLPPTFSAQNLVQLVMNYSNVEKLWDGVVNMRELDLSETAIEELPLSLGCLSQLETLSLWRCQSLKHLPNNLVGLRSLRYLKVTGCMKLQSLPDLPPSIEILWASDCSSLATIPVSTDPLNTNMKEIRLANCMNLDESLLNDITWNIHLKLMNHYAFERVSSEEDQEKNQIDDDDVYIRTGGIYPGSKVPNWFKYRTSQASSITIPLQFNNIAPEALIFCVVLSQFPLSSFLNSITVHCFLENDNNDGERLHVKSLDIVLPGTELNSDHVCLFYVECLGVMNGRIEESTRDSYEHKVSFEFSAQSEVEQGEEYKEIVIKGCGVYLIYASQQSFIKDIGELKTRKAPLLEEASEAIDDLESSGEKKDEEETVSLAEKSSGYIFPTPSLTTGTWKKATQGLKDLREETERFARFFPSVFTKELGRACNYVDNWSLRMYMASESRLLNFLPLLPVVDLTNLVSRGIKAKSLKCGMAEFSLVQLSSFHADWFAWLLFVEI 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0987 805 Coils Coil 657 677 - -
Lele41g0987 805 ProSiteProfiles F-box domain profile. 57 106 IPR001810 GO:0005515
Lele41g0987 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 196 458 IPR044974 GO:0006952
Lele41g0987 805 Pfam F-box domain 60 93 IPR001810 GO:0005515
Lele41g0987 805 SUPERFAMILY F-box domain 56 92 IPR036047 GO:0005515
Lele41g0987 805 Gene3D - 41 98 - -
Lele41g0987 805 SUPERFAMILY L domain-like 220 461 - -
Lele41g0987 805 Pfam C-JID domain 493 639 IPR045344 -
Lele41g0987 805 Gene3D Ribonuclease Inhibitor 233 488 IPR032675 -
Lele41g0987 805 Gene3D - 165 224 IPR035897 -
Lele41g0987 805 Pfam TIR domain 175 222 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0987 Lele-ChrLele41 19291880 19299188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0987 208 442 WRKY Transcription Factor Family AT4G12020 35.341 1.29e-31 131