Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele41g0985 ATGGGATCTTTTTCTAAGTTTTCGGGTATACAATATGACGTCTTCATCAGCTTCAGAGGCACAGATACCCGTCATGGTTTTCTTAGCCATTTGAGAAAGGAACTGCGGCAGAAGCAAATTGATGCCTATGTAGATGGCAGACTTGAAAATGGAGATCAAATATCACCTGCACTTTTAAGAGCCATTAAAGAATCACTCATTTCATTGATCATATTTTCATCGGACTATGCTTCTTCAAAATGTTGCTTAGAAGAACTTGTGCAGATTATTGAATGTATGAAGAAGCAGAAACAGATTGTAATTCCCGTTTTCTATAACACAGACCCCTCAACTGTGAGACATCAGAAAGGGTCTTATGGAGATGCTTTAGCAAAACATGGCAAGTATTATGAGGAAAAGGTGCCGATTTGGAGATCAGCTTTGAAAGAGGCTGCTAATTTATCTGGGTTTCATTCGTCAAATTATGGGGATGAGGCTGAGCTCATAGAAGAAACTGCCAAATCTCTGTCAACAAAGTTGAATATTTTGTACCGAAGTGACTTCACAGATCTTGTTGGAATTAGTGAAAGGATTGCAGAATTAGAATCATTGATGAATGAAGGGTCAAAAGATGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATCGAATCCATTGATAATCCTGGGAACCGTAGTCGACTATGGGATGCTAATGATATATATCGTGTATTAAAATATGACATGGGGACTACAACTGTTCAAAGCATAACTCTGAATGTGACAAAAATTGAAGATCTGCACATAAGTCCAAAAGCCTTGTCCTCAATGGACAATCTGAAATTTCTCAATTTTTATAAAGGTACTTCTTTTGAAAAGGGGAATTTACATCTTCCTTGTGGTCTTGAATTCTTGTCGAATAAGCTCAGATTTTTGCGTTGGGATGAATACCCTTCAAAGTCATTGCCGGCAACATTTTCAGCTGAAAACATTGTTACTGTGAAAATGAACAATAGCAAACTAAGAAAACTTTGGGATGGTGTCCAGAACCTCGCGAATTTAAGGGAGATTTTCCTTACTGAATCAGAGTACTTGATTGAGCTTCCTGATTTTTCAAAGGCTAAGCTTCTTAAAAATGTAAATCTTAGCTATTGTACAAGGTTGTGTAGTGTTCATCCATCTATTTTAACTCTCCCCAATCTTAGCCATTTGAGGCTTTCACATTGCAAAGCCCTTACTAGCCTTACCAGCAATACCTCTCTAAAATCACTTACATTTCTCGCACTCAATGAATGTTCAAGACTCAGAGAGTTCTCAGTAACATCAGAAAAAAGGTTAAAATTGTTTCTTTCAAATACAGCCTTCAATGATGAATTGTGTTCATCAAGTGGGCATCTTGGCAACATTGAAGATTTGAGTCTAGATGGCTGCCAGATTCTCACAAATCTTCCCTACAAGTTAGTTGACCTTAGCGGTCTTCGATATCTGAGTATTTCTGGTTGCAACAAGTTAGCATCAAATTTGCATTTCCTATTAGATAGATTACGCAGTTTGGAAAATTTGTTGCTGAATAATTGCAGCAACTTATTTGAACTGCCTGAGAACATCAGTTTGTTGTCATCGTTATGTGAGTTATCACTCACAGGGTCAACTAATTTGACAACATTGCCTGCGAGCGTCAAGCATCTTTTGAGGCTACAATGTCTTAGGTTGGACAAATGCAAAAAGCTTCAATCTCTACCAGAACTTCCACCCTCCATTGCAAATTTGTCTGCTATGGACTGCACATCCCTTGAGACGCTAAAGTTAAGTTCATTGCCTACAGTCACATTGGAAGATGAAGTATGCTTTCACTTTGGAAACTGCAGGAAATTGGATCAGCAATCAATCAAAGCTATTGAAGCAAAAGCTCTGCTTGAGATGGATAAATTGGTATCAGCTGTTGAACAAGGCATTGCTTGGAGTATGCAGGCTCAACTTGTATATCCAGGAACCAAAGTTCCAGAGTGGTTCATGTACCGGTCAACACAATCTTCTGTCACTGTGGATCTCTTCTCTATCCCACAACCTAAGGATTGGAGTTTTATTTTCTGTGCTGTTGTTTCTCACTCTCAGTCCTTTGTTTACTTTGAAACTGAATGGTATTTTAGTGATGGCCAACAGGTTATGGATGAGAATATATATTACTTTTGCAAACATATCGGCGTCCTTGATTCAGATAATGTTTGTCTCTGGTATATCTCAGATCTTCCTTCAGAGGTGCAAAGGATAGTTGAAGAGAAGAGTGCTGATAAGAGTACCACTAATCATCGAACAGTTGAAATAAAATTCGTTGTTAAAACTCCAAGTCCAGTTACAGTTTTGGGTCTCAAAGGTTGTGGGGTATGCCCAACAGGTGCATCGGGTTATCGAAATTATATTCAACAAATGGAATCGGTGTTACAGTCACAACCTAATTCAGTGGGAGCCAAAGTAGGTTGCTCCTGTGGCAACACCGATGACAAAGAAGTGGTTACTACGAAGTCTAAGGATTTTATCTTCCCAACCCCACCAACTGTGACATGGAAGAATAGAACACAGGGCTTGAAAGATATTATCTTTCTTTGA 2586 0.3882 MGSFSKFSGIQYDVFISFRGTDTRHGFLSHLRKELRQKQIDAYVDGRLENGDQISPALLRAIKESLISLIIFSSDYASSKCCLEELVQIIECMKKQKQIVIPVFYNTDPSTVRHQKGSYGDALAKHGKYYEEKVPIWRSALKEAANLSGFHSSNYGDEAELIEETAKSLSTKLNILYRSDFTDLVGISERIAELESLMNEGSKDVRVIGIWGMGGIESIDNPGNRSRLWDANDIYRVLKYDMGTTTVQSITLNVTKIEDLHISPKALSSMDNLKFLNFYKGTSFEKGNLHLPCGLEFLSNKLRFLRWDEYPSKSLPATFSAENIVTVKMNNSKLRKLWDGVQNLANLREIFLTESEYLIELPDFSKAKLLKNVNLSYCTRLCSVHPSILTLPNLSHLRLSHCKALTSLTSNTSLKSLTFLALNECSRLREFSVTSEKRLKLFLSNTAFNDELCSSSGHLGNIEDLSLDGCQILTNLPYKLVDLSGLRYLSISGCNKLASNLHFLLDRLRSLENLLLNNCSNLFELPENISLLSSLCELSLTGSTNLTTLPASVKHLLRLQCLRLDKCKKLQSLPELPPSIANLSAMDCTSLETLKLSSLPTVTLEDEVCFHFGNCRKLDQQSIKAIEAKALLEMDKLVSAVEQGIAWSMQAQLVYPGTKVPEWFMYRSTQSSVTVDLFSIPQPKDWSFIFCAVVSHSQSFVYFETEWYFSDGQQVMDENIYYFCKHIGVLDSDNVCLWYISDLPSEVQRIVEEKSADKSTTNHRTVEIKFVVKTPSPVTVLGLKGCGVCPTGASGYRNYIQQMESVLQSQPNSVGAKVGCSCGNTDDKEVVTTKSKDFIFPTPPTVTWKNRTQGLKDIIFL 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele41g0985 861 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 150 IPR035897 -
Lele41g0985 861 Gene3D - 8 177 IPR035897 -
Lele41g0985 861 Gene3D Ribonuclease Inhibitor 439 633 IPR032675 -
Lele41g0985 861 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 451 594 IPR044974 GO:0006952
Lele41g0985 861 SUPERFAMILY L domain-like 260 618 - -
Lele41g0985 861 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Lele41g0985 861 SMART till_3 11 147 IPR000157 GO:0007165
Lele41g0985 861 Pfam C-JID domain 655 748 IPR045344 -
Lele41g0985 861 Coils Coil 494 514 - -
Lele41g0985 861 Gene3D Ribonuclease Inhibitor 241 438 IPR032675 -
Lele41g0985 861 Pfam TIR domain 11 187 IPR000157 GO:0007165
Lele41g0985 861 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele41g0985 Lele-ChrLele41 19280352 19284035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele41g0985 217 538 WRKY Transcription Factor Family AT4G12020 34.848 3.38e-40 159